ENSG00000141027

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

  • Note:

    • About the Coding Potential: Please check the spreadsheet in the “Results” tag to confirm the coding potential. The above figure only show the predicted coding potential. The “gene_biotype” in the result spreadsheet is from the database record. Therefore, if you find conflicts between “gene_biotype” and “codingPotential”, please trust the “gene_biotype”.

    • Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

    • For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000395849 ENSG00000141027 No_inf pgwt_inf NCOR1 protein_coding protein_coding 18.57736 28.76125 14.65967 2.754575 1.452512 -0.9717915 0.3344846 0.000000 1.0034537 0.0000000 0.3945450 6.6631364 0.02464167 0.000000 0.073925 0.073925 0.228200565 0.006458964 FALSE TRUE
ENST00000464381 ENSG00000141027 No_inf pgwt_inf NCOR1 protein_coding retained_intron 18.57736 28.76125 14.65967 2.754575 1.452512 -0.9717915 1.2946662 2.979882 0.0000000 0.1751406 0.0000000 -8.2239448 0.05597500 0.104900 0.000000 -0.104900 0.006458964 0.006458964 FALSE TRUE
ENST00000579573 ENSG00000141027 No_inf pgwt_inf NCOR1 protein_coding protein_coding 18.57736 28.76125 14.65967 2.754575 1.452512 -0.9717915 0.8067923 1.673132 0.0000000 1.6731320 0.0000000 -7.3950045 0.04160833 0.066775 0.000000 -0.066775 1.000000000 0.006458964 FALSE FALSE
ENST00000582565 ENSG00000141027 No_inf pgwt_inf NCOR1 protein_coding retained_intron 18.57736 28.76125 14.65967 2.754575 1.452512 -0.9717915 1.8006567 3.041963 2.3600066 1.6395156 0.4985447 -0.3648465 0.08563333 0.100050 0.156850 0.056800 0.992847247 0.006458964 FALSE FALSE
ENST00000583226 ENSG00000141027 No_inf pgwt_inf NCOR1 protein_coding protein_coding_CDS_not_defined 18.57736 28.76125 14.65967 2.754575 1.452512 -0.9717915 1.9429041 5.828712 0.0000000 2.6570999 0.0000000 -9.1895064 0.06231667 0.186950 0.000000 -0.186950 0.319895493 0.006458964 FALSE FALSE
MSTRG.12153.25 ENSG00000141027 No_inf pgwt_inf NCOR1 protein_coding   18.57736 28.76125 14.65967 2.754575 1.452512 -0.9717915 0.6118320 1.642382 0.0000000 0.6542137 0.0000000 -7.3684035 0.02419167 0.054400 0.000000 -0.054400 0.531313352 0.006458964 FALSE TRUE
MSTRG.12153.26 ENSG00000141027 No_inf pgwt_inf NCOR1 protein_coding   18.57736 28.76125 14.65967 2.754575 1.452512 -0.9717915 0.5713965 0.243694 1.4704956 0.2436940 0.4985895 2.5449188 0.03724167 0.010175 0.101550 0.091375 0.620961723 0.006458964 FALSE TRUE
MSTRG.12153.6 ENSG00000141027 No_inf pgwt_inf NCOR1 protein_coding   18.57736 28.76125 14.65967 2.754575 1.452512 -0.9717915 1.0253369 1.748052 0.3621073 0.3703790 0.3621073 -2.2401871 0.05340833 0.059450 0.029825 -0.029625 0.896006982 0.006458964 FALSE TRUE
MSTRG.12153.9 ENSG00000141027 No_inf pgwt_inf NCOR1 protein_coding   18.57736 28.76125 14.65967 2.754575 1.452512 -0.9717915 4.0277017 3.300279 4.1680623 1.2298231 0.4216744 0.3358814 0.26410833 0.109850 0.299250 0.189400 0.957434644 0.006458964 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

Help

Please Click HERE to learn more details about the results of IsoformSwitchAnalyzeR.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand pgwt.inf No.inf log2fold_No.inf_pgwt.inf
ENSG00000141027 E001 0.0000000       17 16029065 16029156 92 -      
ENSG00000141027 E002 0.0000000       17 16029157 16029394 238 -      
ENSG00000141027 E003 0.1316618 0.0122689712 0.7419284799   17 16029395 16029416 22 - 0.000 0.083 9.661
ENSG00000141027 E004 0.5242513 0.2176797991 0.1393996631   17 16029417 16029453 37 - 0.000 0.264 14.113
ENSG00000141027 E005 17.1816458 0.0008257454 0.0638214101 0.284923335 17 16029454 16031403 1950 - 1.160 1.298 0.488
ENSG00000141027 E006 35.2791683 0.0035464820 0.7854605285 0.925611739 17 16031404 16031987 584 - 1.537 1.556 0.064
ENSG00000141027 E007 14.2823911 0.0009413574 0.1296870956 0.417905445 17 16031988 16032091 104 - 1.095 1.218 0.438
ENSG00000141027 E008 29.6229440 0.0053398389 0.5490488054 0.810521303 17 16032092 16032432 341 - 1.450 1.491 0.140
ENSG00000141027 E009 8.4156773 0.0024167970 0.7320366310 0.902315228 17 16032433 16032472 40 - 0.982 0.952 -0.108
ENSG00000141027 E010 6.3399060 0.0044312648 0.9038848522 0.971556838 17 16032473 16032483 11 - 0.846 0.862 0.065
ENSG00000141027 E011 18.1077995 0.0008109941 0.9163753684 0.975292194 17 16034765 16034941 177 - 1.273 1.269 -0.011
ENSG00000141027 E012 4.8286801 0.0035382646 0.8458332319 0.949119680 17 16034942 16034944 3 - 0.768 0.749 -0.078
ENSG00000141027 E013 0.2456120 0.0162924040 0.8027844872   17 16039220 16039432 213 - 0.109 0.083 -0.450
ENSG00000141027 E014 11.2808487 0.0081577360 0.8780357536 0.961329788 17 16039433 16039516 84 - 1.085 1.075 -0.034
ENSG00000141027 E015 10.9734523 0.0013682595 0.5191684122 0.791949484 17 16039517 16039654 138 - 1.030 1.090 0.218
ENSG00000141027 E016 0.4905643 0.1127438293 0.7674388769   17 16039655 16040108 454 - 0.196 0.152 -0.449
ENSG00000141027 E017 1.9972658 0.0093736881 0.7163866307 0.895061729 17 16040441 16040444 4 - 0.434 0.491 0.287
ENSG00000141027 E018 1.7518006 0.0088051592 0.6334768642 0.853911757 17 16040445 16040491 47 - 0.386 0.460 0.398
ENSG00000141027 E019 0.0000000       17 16040492 16040494 3 -      
ENSG00000141027 E020 0.0000000       17 16040495 16040659 165 -      
ENSG00000141027 E021 0.1139502 0.0111879499 0.3873302074   17 16046892 16046899 8 - 0.109 0.000 -13.983
ENSG00000141027 E022 0.2456120 0.0162924040 0.8027844872   17 16046900 16046950 51 - 0.109 0.083 -0.450
ENSG00000141027 E023 1.5863935 0.0086289318 0.3980650504 0.710209260 17 16046951 16046989 39 - 0.478 0.354 -0.672
ENSG00000141027 E024 8.7459359 0.0017633053 0.4072784224 0.716604873 17 16046990 16047093 104 - 0.926 1.009 0.309
ENSG00000141027 E025 11.4438622 0.0012409025 0.7236785729 0.898647970 17 16048845 16048985 141 - 1.064 1.098 0.122
ENSG00000141027 E026 3.5493664 0.0040411030 0.2997308574 0.627029961 17 16048986 16048988 3 - 0.724 0.595 -0.549
ENSG00000141027 E027 0.4910700 0.0158791172 0.7500474103   17 16048989 16049397 409 - 0.197 0.152 -0.450
ENSG00000141027 E028 0.5084879 0.0231607482 0.4995414953   17 16056974 16057513 540 - 0.109 0.212 1.135
ENSG00000141027 E029 15.1267950 0.0173736105 0.9034570204 0.971460933 17 16057514 16057737 224 - 1.201 1.195 -0.021
ENSG00000141027 E030 6.2878649 0.0082526135 0.1599926491 0.462834658 17 16057907 16057994 88 - 0.746 0.910 0.638
ENSG00000141027 E031 7.8238236 0.0413021272 0.8775997359 0.961329788 17 16057995 16058064 70 - 0.926 0.942 0.060
ENSG00000141027 E032 0.2617264 0.2656631336 0.4363566608   17 16058065 16058336 272 - 0.000 0.152 13.168
ENSG00000141027 E033 10.5094551 0.0013775293 0.6214339881 0.848035904 17 16058471 16058599 129 - 1.075 1.035 -0.143
ENSG00000141027 E034 24.1455685 0.0007015989 0.1254773961 0.410646264 17 16061401 16061757 357 - 1.441 1.354 -0.302
ENSG00000141027 E035 8.7734342 0.0015784198 0.6080967503 0.841644601 17 16061758 16061866 109 - 1.007 0.962 -0.164
ENSG00000141027 E036 4.3029780 0.0535015796 0.5401167291 0.805184967 17 16061867 16061894 28 - 0.768 0.679 -0.367
ENSG00000141027 E037 9.1477728 0.0016844541 0.6590815940 0.866805429 17 16062105 16062270 166 - 1.019 0.982 -0.136
ENSG00000141027 E038 5.4321837 0.0027035649 0.6506583204 0.863046514 17 16064068 16064187 120 - 0.827 0.780 -0.186
ENSG00000141027 E039 5.6250733 0.0026229607 0.1714528524 0.479792278 17 16064870 16065019 150 - 0.896 0.749 -0.575
ENSG00000141027 E040 9.5335131 0.0014377823 0.0003863081 0.008609384 17 16065485 16065691 207 - 1.177 0.862 -1.157
ENSG00000141027 E041 3.2567148 0.0125802054 0.0348447543 0.201477903 17 16065692 16065694 3 - 0.768 0.491 -1.215
ENSG00000141027 E042 0.7711646 0.0142837139 0.1911044725 0.505922496 17 16065695 16065885 191 - 0.109 0.311 1.872
ENSG00000141027 E043 11.1281099 0.0026864052 0.0441083144 0.230738469 17 16067894 16068121 228 - 1.168 1.000 -0.608
ENSG00000141027 E044 0.6045951 0.0145060522 0.4236841080   17 16068122 16068412 291 - 0.269 0.152 -1.034
ENSG00000141027 E045 16.0419107 0.0008704978 0.3443329931 0.665763709 17 16070165 16070525 361 - 1.259 1.195 -0.227
ENSG00000141027 E046 11.8221349 0.0013518930 0.6875464061 0.880663253 17 16071409 16071665 257 - 1.075 1.112 0.135
ENSG00000141027 E047 6.0558258 0.0023451961 0.6888460157 0.881264721 17 16072145 16072228 84 - 0.863 0.823 -0.154
ENSG00000141027 E048 8.0554986 0.0017510017 0.8657435102 0.957285319 17 16073429 16073569 141 - 0.955 0.942 -0.047
ENSG00000141027 E049 8.5257644 0.0016138203 0.6302553461 0.852058404 17 16075534 16075702 169 - 0.994 0.952 -0.156
ENSG00000141027 E050 0.1315150 0.0122514026 0.7419383333   17 16078848 16078872 25 - 0.000 0.083 12.518
ENSG00000141027 E051 6.0204306 0.0024309522 0.3325118528 0.655964947 17 16079964 16080064 101 - 0.896 0.795 -0.391
ENSG00000141027 E052 0.0000000       17 16080351 16080407 57 -      
ENSG00000141027 E053 6.5002415 0.0578168493 0.5441572841 0.807739330 17 16080408 16080509 102 - 0.809 0.898 0.347
ENSG00000141027 E054 0.0000000       17 16080510 16080513 4 -      
ENSG00000141027 E055 9.6774300 0.0221040950 0.1454903236 0.441171089 17 16080607 16080727 121 - 0.911 1.075 0.607
ENSG00000141027 E056 9.3307190 0.0031903273 0.7247152778 0.899157236 17 16086282 16086442 161 - 0.982 1.018 0.135
ENSG00000141027 E057 0.2461098 0.0162637624 0.8028626765   17 16087172 16087262 91 - 0.109 0.083 -0.450
ENSG00000141027 E058 1.8314290 0.0115082001 0.3897197071 0.703289267 17 16087263 16087345 83 - 0.517 0.392 -0.642
ENSG00000141027 E059 0.3935270 0.0159611271 0.1812103487   17 16091564 16091862 299 - 0.000 0.212 13.981
ENSG00000141027 E060 11.9481677 0.0013966958 0.2885296622 0.616020501 17 16091863 16092058 196 - 1.151 1.068 -0.301
ENSG00000141027 E061 11.6661739 0.0011399082 0.1460821426 0.441987329 17 16098367 16098496 130 - 1.160 1.044 -0.419
ENSG00000141027 E062 23.9755007 0.0005940270 0.4270138328 0.731051868 17 16101250 16101717 468 - 1.413 1.370 -0.151
ENSG00000141027 E063 6.3497858 0.0026147412 0.6843730967 0.879654977 17 16101718 16101757 40 - 0.827 0.875 0.183
ENSG00000141027 E064 4.6991278 0.0032609829 0.7392417485 0.905686302 17 16101758 16101805 48 - 0.768 0.732 -0.145
ENSG00000141027 E065 10.5624361 0.0013845944 0.8726829585 0.960070617 17 16108786 16108912 127 - 1.042 1.060 0.065
ENSG00000141027 E066 13.1192923 0.0012149392 0.3091945699 0.635508090 17 16117888 16118027 140 - 1.085 1.171 0.309
ENSG00000141027 E067 7.8806453 0.0042970451 0.3840075527 0.699510375 17 16119423 16119485 63 - 0.880 0.972 0.349
ENSG00000141027 E068 20.8387345 0.0317348875 0.1429087626 0.437486568 17 16121052 16121269 218 - 1.231 1.381 0.525
ENSG00000141027 E069 0.0000000       17 16122610 16122635 26 -      
ENSG00000141027 E070 5.4217175 0.0027154686 0.1135660946 0.389656780 17 16126082 16126106 25 - 0.674 0.862 0.757
ENSG00000141027 E071 3.5204937 0.0051725825 0.2884148864 0.615979750 17 16126107 16126131 25 - 0.553 0.697 0.628
ENSG00000141027 E072 6.8424726 0.0041875895 0.7633217607 0.915972309 17 16126132 16126206 75 - 0.863 0.898 0.135
ENSG00000141027 E073 2.1107739 0.0218494833 0.9451520151 0.986130894 17 16126207 16126209 3 - 0.477 0.491 0.065
ENSG00000141027 E074 9.6752103 0.0021019024 0.9622519524 0.991096547 17 16137311 16137412 102 - 1.019 1.018 -0.002
ENSG00000141027 E075 0.0000000       17 16137413 16137542 130 -      
ENSG00000141027 E076 5.9778642 0.0026223790 0.7325527894 0.902528880 17 16138158 16138212 55 - 0.809 0.850 0.161
ENSG00000141027 E077 14.1324652 0.0010589686 0.2130429632 0.534973282 17 16139008 16139186 179 - 1.105 1.206 0.363
ENSG00000141027 E078 10.2165267 0.0015298099 0.5818308505 0.827748098 17 16143606 16143696 91 - 1.007 1.060 0.194
ENSG00000141027 E079 16.4742102 0.0137237133 0.4064693390 0.715896332 17 16146376 16146548 173 - 1.185 1.260 0.264
ENSG00000141027 E080 6.8077756 0.0020801565 0.8126354726 0.936241192 17 16149451 16149517 67 - 0.896 0.875 -0.080
ENSG00000141027 E081 2.1215858 0.0069985312 0.0022809291 0.033430537 17 16151590 16151616 27 - 0.699 0.264 -2.257
ENSG00000141027 E082 5.9231042 0.0113387632 0.6158784620 0.845540746 17 16151946 16151998 53 - 0.863 0.809 -0.209
ENSG00000141027 E083 5.3372235 0.0027960431 0.9819070030 0.998362704 17 16153339 16153395 57 - 0.789 0.795 0.024
ENSG00000141027 E084 6.6508355 0.0502948326 0.3243742173 0.648655020 17 16158760 16158873 114 - 0.789 0.921 0.510
ENSG00000141027 E085 0.0000000       17 16164871 16164905 35 -      
ENSG00000141027 E086 0.1308632 0.0122473638 0.7418462748   17 16164906 16164978 73 - 0.000 0.083 12.518
ENSG00000141027 E087 9.6299455 0.0015984240 0.3127883693 0.638632746 17 16164979 16165161 183 - 0.955 1.052 0.358
ENSG00000141027 E088 5.2071554 0.0031689383 0.9164285348 0.975292194 17 16171803 16171862 60 - 0.789 0.780 -0.035
ENSG00000141027 E089 5.2244110 0.0717307280 0.8239036687 0.940346350 17 16171863 16171995 133 - 0.768 0.795 0.106
ENSG00000141027 E090 0.1145948 0.0112013511 0.3873705913   17 16171996 16172020 25 - 0.109 0.000 -13.983
ENSG00000141027 E091 6.5278602 0.0062074222 0.4680445183 0.759704014 17 16186554 16186687 134 - 0.911 0.837 -0.286
ENSG00000141027 E092 8.5869979 0.0017252101 0.1837548961 0.496984533 17 16194462 16194639 178 - 1.042 0.921 -0.450
ENSG00000141027 E093 0.5071915 0.0313689269 0.5011421417   17 16198171 16198600 430 - 0.109 0.212 1.135
ENSG00000141027 E094 1.1116961 0.0118513475 0.8861392428 0.964358220 17 16198601 16198719 119 - 0.331 0.311 -0.128
ENSG00000141027 E095 4.9223766 0.0031226211 0.4917822858 0.775348354 17 16215362 16215554 193 - 0.809 0.732 -0.305
ENSG00000141027 E096 0.2454678 0.0163002083 0.8030009324   17 16215654 16216091 438 - 0.109 0.083 -0.449
ENSG00000141027 E097 0.0000000       17 16217865 16218185 321 -      

Help

Please Click HERE to learn more details about the results from DEXseq.