ENSG00000157800

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

  • Note:

    • About the Coding Potential: Please check the spreadsheet in the “Results” tag to confirm the coding potential. The above figure only show the predicted coding potential. The “gene_biotype” in the result spreadsheet is from the database record. Therefore, if you find conflicts between “gene_biotype” and “codingPotential”, please trust the “gene_biotype”.

    • Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

    • For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000326232 ENSG00000157800 No_inf pgwt_inf SLC37A3 protein_coding protein_coding 11.26273 3.596583 10.62739 0.869526 7.296701 1.560439 0.9496205 0.0000000 0.5009163 0.0000000 0.3794037 5.67501512 0.18175000 0.000000 0.169000 0.169000 0.992847247 0.003355293 FALSE TRUE
ENST00000340308 ENSG00000157800 No_inf pgwt_inf SLC37A3 protein_coding protein_coding 11.26273 3.596583 10.62739 0.869526 7.296701 1.560439 0.4657096 0.0000000 1.3971287 0.0000000 0.4717840 7.13661049 0.09658333 0.000000 0.289750 0.289750 0.693665737 0.003355293 FALSE TRUE
ENST00000447932 ENSG00000157800 No_inf pgwt_inf SLC37A3 protein_coding protein_coding 11.26273 3.596583 10.62739 0.869526 7.296701 1.560439 0.5247038 1.5741114 0.0000000 0.2261263 0.0000000 -7.30752998 0.16674167 0.500225 0.000000 -0.500225 0.003355293 0.003355293 FALSE TRUE
ENST00000469636 ENSG00000157800 No_inf pgwt_inf SLC37A3 protein_coding protein_coding 11.26273 3.596583 10.62739 0.869526 7.296701 1.560439 0.3902083 0.9674729 0.2031521 0.6379132 0.2031521 -2.19717333 0.10915833 0.243400 0.084075 -0.159325 0.992847247 0.003355293   FALSE
ENST00000485734 ENSG00000157800 No_inf pgwt_inf SLC37A3 protein_coding protein_coding 11.26273 3.596583 10.62739 0.869526 7.296701 1.560439 0.3172832 0.0000000 0.4229098 0.0000000 0.4229098 5.43599464 0.06822500 0.000000 0.088350 0.088350 1.000000000 0.003355293 FALSE FALSE
ENST00000495257 ENSG00000157800 No_inf pgwt_inf SLC37A3 protein_coding protein_coding_CDS_not_defined 11.26273 3.596583 10.62739 0.869526 7.296701 1.560439 0.6945590 0.8311911 0.7996682 0.4297322 0.3197797 -0.05510274 0.12453333 0.191725 0.127275 -0.064450 0.992847247 0.003355293   FALSE
MSTRG.26982.26 ENSG00000157800 No_inf pgwt_inf SLC37A3 protein_coding   11.26273 3.596583 10.62739 0.869526 7.296701 1.560439 7.4340705 0.0000000 7.1926081 0.0000000 7.1926081 9.49237559 0.15307500 0.000000 0.221575 0.221575 0.992847247 0.003355293   FALSE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

Help

Please Click HERE to learn more details about the results of IsoformSwitchAnalyzeR.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand pgwt.inf No.inf log2fold_No.inf_pgwt.inf
ENSG00000157800 E001 0.0000000       7 140293693 140295352 1660 -      
ENSG00000157800 E002 0.0000000       7 140295985 140296137 153 -      
ENSG00000157800 E003 0.0000000       7 140297300 140297523 224 -      
ENSG00000157800 E004 0.0000000       7 140333752 140333753 2 -      
ENSG00000157800 E005 0.9799052 0.123305829 0.909680889 0.97334058 7 140333754 140333790 37 - 0.293 0.300 0.046
ENSG00000157800 E006 16.0395562 0.001347416 0.003030640 0.04101059 7 140333791 140334869 1079 - 1.131 1.304 0.613
ENSG00000157800 E007 1.4730609 0.010264753 0.912983467 0.97424299 7 140334870 140334890 21 - 0.388 0.397 0.046
ENSG00000157800 E008 2.8601800 0.085783232 0.104282280 0.37219872 7 140334891 140334988 98 - 0.707 0.438 -1.235
ENSG00000157800 E009 2.0441308 0.007581066 0.275035911 0.60305466 7 140334989 140335104 116 - 0.562 0.397 -0.828
ENSG00000157800 E010 2.7182383 0.005832790 0.561302376 0.81681189 7 140335105 140335289 185 - 0.533 0.600 0.309
ENSG00000157800 E011 1.1307197 0.011318214 0.269852523 0.59801344 7 140335290 140335320 31 - 0.236 0.397 1.046
ENSG00000157800 E012 1.7511265 0.013440212 0.238354538 0.56401525 7 140335321 140335436 116 - 0.343 0.510 0.894
ENSG00000157800 E013 0.6037991 0.017581349 0.706467506   7 140335437 140335439 3 - 0.236 0.175 -0.539
ENSG00000157800 E014 0.9460995 0.013799665 0.176746391 0.48794835 7 140335440 140335454 15 - 0.388 0.175 -1.539
ENSG00000157800 E015 1.5514804 0.009155931 0.196566163 0.51342500 7 140335455 140335471 17 - 0.501 0.300 -1.124
ENSG00000157800 E016 1.8142885 0.008244000 0.511345045 0.78735005 7 140335472 140335504 33 - 0.501 0.397 -0.539
ENSG00000157800 E017 1.7355340 0.008756475 0.512901476 0.78848022 7 140337284 140337349 66 - 0.388 0.476 0.461
ENSG00000157800 E018 0.2626639 0.016199432 0.219823626   7 140337350 140337825 476 - 0.000 0.175 12.492
ENSG00000157800 E019 1.1469752 0.012078665 0.071286547 0.30303632 7 140343412 140343563 152 - 0.171 0.438 1.854
ENSG00000157800 E020 0.0000000       7 140343564 140344086 523 -      
ENSG00000157800 E021 0.3427201 0.016091284 0.116745932   7 140345216 140345263 48 - 0.236 0.000 -13.711
ENSG00000157800 E022 0.8510740 0.014247894 0.768611331 0.91860284 7 140345869 140345929 61 - 0.293 0.242 -0.369
ENSG00000157800 E023 0.7716775 0.016255115 0.077746959 0.31794739 7 140345930 140345970 41 - 0.094 0.351 2.368
ENSG00000157800 E024 0.0000000       7 140348458 140348625 168 -      
ENSG00000157800 E025 1.6036020 0.009372498 0.692151880 0.88287699 7 140348626 140348767 142 - 0.388 0.438 0.269
ENSG00000157800 E026 1.3073476 0.154853841 0.334894477 0.65796621 7 140351273 140351360 88 - 0.467 0.242 -1.369
ENSG00000157800 E027 1.4382685 0.012488213 0.294818316 0.62308758 7 140351361 140351430 70 - 0.466 0.300 -0.954
ENSG00000157800 E028 1.0961629 0.011589890 0.810183397 0.93539356 7 140351431 140351451 21 - 0.343 0.300 -0.276
ENSG00000157800 E029 0.1315150 0.012521113 0.500667942   7 140351452 140351519 68 - 0.000 0.096 11.652
ENSG00000157800 E030 0.1141751 0.011360498 0.578447773   7 140351520 140351875 356 - 0.094 0.000 -12.492
ENSG00000157800 E031 0.0000000       7 140351876 140351888 13 -      
ENSG00000157800 E032 0.0000000       7 140351889 140351969 81 -      
ENSG00000157800 E033 1.0795254 0.054906053 0.372846719 0.69078075 7 140352062 140352104 43 - 0.388 0.242 -0.954
ENSG00000157800 E034 0.9819878 0.013141424 0.931505273 0.98088650 7 140352105 140352146 42 - 0.293 0.300 0.046
ENSG00000157800 E035 0.1315150 0.012521113 0.500667942   7 140352147 140352181 35 - 0.000 0.096 11.652
ENSG00000157800 E036 1.9448686 0.007888597 0.710581204 0.89253061 7 140355668 140355764 97 - 0.501 0.438 -0.316
ENSG00000157800 E037 1.6217178 0.009851936 0.342755309 0.66427556 7 140358640 140358785 146 - 0.343 0.476 0.724
ENSG00000157800 E038 0.6212832 0.015140220 0.605722913   7 140364408 140364458 51 - 0.171 0.242 0.631
ENSG00000157800 E039 0.6209171 0.016227527 0.607599709   7 140364459 140364491 33 - 0.171 0.242 0.631
ENSG00000157800 E040 0.4913557 0.016762893 0.949443784   7 140369590 140369669 80 - 0.171 0.175 0.046
ENSG00000157800 E041 0.4740128 0.016651749 0.352274434   7 140369670 140369682 13 - 0.236 0.096 -1.539
ENSG00000157800 E042 0.0000000       7 140379214 140379258 45 -      
ENSG00000157800 E043 0.0000000       7 140379259 140379307 49 -      
ENSG00000157800 E044 0.0000000       7 140379308 140379471 164 -      
ENSG00000157800 E045 0.2277562 0.015855316 0.267328588   7 140379829 140379877 49 - 0.171 0.000 -13.284
ENSG00000157800 E046 0.2277562 0.015855316 0.267328588   7 140379878 140379888 11 - 0.171 0.000 -13.284
ENSG00000157800 E047 0.0000000       7 140379889 140380281 393 -      
ENSG00000157800 E048 1.4030579 0.010218738 0.021593099 0.15115746 7 140380282 140380390 109 - 0.533 0.175 -2.276
ENSG00000157800 E049 1.1573016 0.011179119 0.009279545 0.08852002 7 140382438 140382482 45 - 0.501 0.096 -3.124
ENSG00000157800 E050 1.3236334 0.010846408 0.421662892 0.72757796 7 140382483 140382596 114 - 0.429 0.300 -0.761
ENSG00000157800 E051 0.6403038 0.099406822 0.166089490 0.47213788 7 140398416 140398550 135 - 0.094 0.300 2.047
ENSG00000157800 E052 0.0000000       7 140398599 140398681 83 -      
ENSG00000157800 E053 0.0000000       7 140400336 140402601 2266 -      
ENSG00000157800 E054 0.0000000       7 140402602 140402822 221 -      
ENSG00000157800 E055 0.0000000       7 140404185 140404433 249 -      

Help

Please Click HERE to learn more details about the results from DEXseq.