ENSG00000169045

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

  • Note:

    • About the Coding Potential: Please check the spreadsheet in the “Results” tag to confirm the coding potential. The above figure only show the predicted coding potential. The “gene_biotype” in the result spreadsheet is from the database record. Therefore, if you find conflicts between “gene_biotype” and “codingPotential”, please trust the “gene_biotype”.

    • Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

    • For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000510411 ENSG00000169045 No_inf pgwt_inf HNRNPH1 protein_coding protein_coding 353.8693 367.1821 377.4628 11.26478 25.88363 0.03983767 18.78788 0.00000 25.661895 0.000000 3.7031960 11.3259741 0.05540833 0.000000 0.070250 0.070250 2.741885e-08 2.741885e-08 FALSE  
ENST00000510678 ENSG00000169045 No_inf pgwt_inf HNRNPH1 protein_coding nonsense_mediated_decay 353.8693 367.1821 377.4628 11.26478 25.88363 0.03983767 40.40391 52.07074 38.342227 4.031392 2.0825016 -0.4414396 0.11428333 0.141600 0.103550 -0.038050 9.928472e-01 2.741885e-08 FALSE  
ENST00000519033 ENSG00000169045 No_inf pgwt_inf HNRNPH1 protein_coding protein_coding 353.8693 367.1821 377.4628 11.26478 25.88363 0.03983767 13.67440 32.68332 8.339883 1.151039 4.9929160 -1.9691680 0.03755833 0.089000 0.023675 -0.065325 8.512029e-01 2.741885e-08 FALSE  
ENST00000523136 ENSG00000169045 No_inf pgwt_inf HNRNPH1 protein_coding protein_coding 353.8693 367.1821 377.4628 11.26478 25.88363 0.03983767 10.22592 0.00000 30.677755 0.000000 21.7066048 11.5834474 0.02434167 0.000000 0.073025 0.073025 9.928472e-01 2.741885e-08    
ENST00000523449 ENSG00000169045 No_inf pgwt_inf HNRNPH1 protein_coding protein_coding 353.8693 367.1821 377.4628 11.26478 25.88363 0.03983767 41.54691 38.69477 40.729432 7.846495 5.0544700 0.0739144 0.11779167 0.103925 0.106950 0.003025 1.000000e+00 2.741885e-08 FALSE  
MSTRG.24027.22 ENSG00000169045 No_inf pgwt_inf HNRNPH1 protein_coding   353.8693 367.1821 377.4628 11.26478 25.88363 0.03983767 30.45508 42.99260 25.888781 1.967191 0.9983028 -0.7315396 0.08630000 0.117850 0.069725 -0.048125 9.859075e-01 2.741885e-08 FALSE  
MSTRG.24027.5 ENSG00000169045 No_inf pgwt_inf HNRNPH1 protein_coding   353.8693 367.1821 377.4628 11.26478 25.88363 0.03983767 87.98157 73.82978 96.891855 3.224685 4.8120928 0.3921261 0.25181667 0.201900 0.258700 0.056800 9.928472e-01 2.741885e-08 FALSE  
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

Help

Please Click HERE to learn more details about the results of IsoformSwitchAnalyzeR.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand pgwt.inf No.inf log2fold_No.inf_pgwt.inf
ENSG00000169045 E001 2.1301462 6.645192e-03 3.115853e-01 6.376780e-01 5 179614178 179614178 1 - 0.404 0.553 0.746
ENSG00000169045 E002 4.5028737 1.465275e-02 1.918495e-01 5.071214e-01 5 179614179 179614179 1 - 0.636 0.805 0.694
ENSG00000169045 E003 5.4835087 4.233578e-03 2.424091e-01 5.686829e-01 5 179614180 179614180 1 - 0.729 0.865 0.539
ENSG00000169045 E004 313.3652662 9.441537e-04 8.102360e-01 9.353973e-01 5 179614181 179614518 338 - 2.496 2.494 -0.006
ENSG00000169045 E005 133.6406208 1.971282e-04 4.872782e-01 7.728608e-01 5 179614519 179614523 5 - 2.135 2.119 -0.052
ENSG00000169045 E006 300.0300042 9.103277e-04 4.330839e-01 7.356844e-01 5 179614524 179614685 162 - 2.483 2.470 -0.046
ENSG00000169045 E007 167.1942962 6.645195e-04 7.336841e-01 9.030037e-01 5 179614686 179614777 92 - 2.216 2.228 0.039
ENSG00000169045 E008 169.5378380 1.040330e-04 4.378770e-01 7.393792e-01 5 179614778 179614876 99 - 2.217 2.238 0.071
ENSG00000169045 E009 129.5382428 1.187007e-04 7.210384e-01 8.974478e-01 5 179614877 179614889 13 - 2.117 2.110 -0.022
ENSG00000169045 E010 190.6366429 2.156299e-03 8.552180e-01 9.530766e-01 5 179614890 179614959 70 - 2.281 2.279 -0.008
ENSG00000169045 E011 25.0443426 5.332902e-04 1.566730e-01 4.583204e-01 5 179614960 179615545 586 - 1.362 1.450 0.303
ENSG00000169045 E012 106.7215553 2.410753e-03 3.658001e-01 6.845897e-01 5 179615546 179615559 14 - 2.046 2.016 -0.099
ENSG00000169045 E013 124.2880897 3.262543e-04 4.730451e-01 7.631457e-01 5 179615560 179615595 36 - 2.105 2.087 -0.057
ENSG00000169045 E014 19.1885982 6.729327e-04 3.295381e-02 1.946141e-01 5 179615596 179616125 530 - 1.214 1.362 0.519
ENSG00000169045 E015 109.4815157 2.730363e-04 6.729718e-02 2.938184e-01 5 179616126 179616140 15 - 2.068 2.017 -0.171
ENSG00000169045 E016 109.7855740 2.807913e-04 5.151214e-01 7.897594e-01 5 179616141 179616157 17 - 2.051 2.034 -0.054
ENSG00000169045 E017 191.2116813 9.137771e-05 6.972263e-01 8.849034e-01 5 179616158 179616218 61 - 2.274 2.286 0.039
ENSG00000169045 E018 103.8281022 2.433920e-03 2.172914e-10 2.449073e-08 5 179616219 179616763 545 - 1.869 2.108 0.801
ENSG00000169045 E019 20.2346465 8.977054e-04 7.262729e-07 4.288646e-05 5 179616764 179616859 96 - 1.098 1.446 1.225
ENSG00000169045 E020 11.7005709 1.149340e-03 3.696573e-06 1.775894e-04 5 179616860 179616868 9 - 0.822 1.240 1.541
ENSG00000169045 E021 102.0305160 1.434848e-04 3.835234e-01 6.992624e-01 5 179616869 179616873 5 - 1.994 2.023 0.098
ENSG00000169045 E022 143.4148907 1.074330e-04 4.296477e-01 7.331494e-01 5 179616874 179616898 25 - 2.144 2.167 0.077
ENSG00000169045 E023 207.5289602 9.716327e-05 5.769778e-01 8.252149e-01 5 179616899 179616958 60 - 2.308 2.323 0.050
ENSG00000169045 E024 27.1409960 5.210936e-03 9.802133e-05 2.903772e-03 5 179616959 179617020 62 - 1.283 1.543 0.901
ENSG00000169045 E025 27.8209333 9.802323e-03 1.547406e-03 2.502913e-02 5 179617021 179617050 30 - 1.316 1.543 0.784
ENSG00000169045 E026 122.9292485 2.902639e-04 8.265162e-01 9.413272e-01 5 179617051 179617059 9 - 2.092 2.089 -0.010
ENSG00000169045 E027 106.5889103 2.847206e-04 9.027976e-01 9.712630e-01 5 179617060 179617110 51 - 2.029 2.029 -0.002
ENSG00000169045 E028 19.0830007 7.032260e-04 5.277633e-04 1.095692e-02 5 179617111 179617513 403 - 1.148 1.392 0.857
ENSG00000169045 E029 239.6076838 8.392775e-05 1.101036e-01 3.831252e-01 5 179617514 179617649 136 - 2.394 2.366 -0.095
ENSG00000169045 E030 153.9069928 1.028557e-04 7.109368e-01 8.926393e-01 5 179617799 179617816 18 - 2.191 2.185 -0.020
ENSG00000169045 E031 250.7172656 2.125838e-03 7.432924e-01 9.075909e-01 5 179617817 179617911 95 - 2.391 2.403 0.040
ENSG00000169045 E032 135.2315275 2.705998e-03 8.312095e-01 9.433642e-01 5 179617912 179617932 21 - 2.133 2.130 -0.011
ENSG00000169045 E033 13.2628527 2.247043e-03 1.760077e-02 1.338233e-01 5 179617933 179617988 56 - 1.031 1.228 0.711
ENSG00000169045 E034 201.1576590 1.893784e-04 3.567405e-02 2.045574e-01 5 179617989 179618044 56 - 2.326 2.283 -0.143
ENSG00000169045 E035 138.8044912 1.153350e-04 2.990807e-04 7.102537e-03 5 179618045 179618060 16 - 2.191 2.100 -0.302
ENSG00000169045 E036 1.6020735 9.963185e-03 9.187391e-01 9.763153e-01 5 179618144 179618144 1 - 0.404 0.421 0.094
ENSG00000169045 E037 140.1099148 1.180062e-04 1.250426e-02 1.075361e-01 5 179618145 179618160 16 - 2.180 2.119 -0.204
ENSG00000169045 E038 160.7182750 3.187859e-04 1.064444e-03 1.884826e-02 5 179618161 179618204 44 - 2.248 2.170 -0.261
ENSG00000169045 E039 112.8941032 1.730302e-04 1.846798e-02 1.375178e-01 5 179618205 179618207 3 - 2.088 2.024 -0.216
ENSG00000169045 E040 118.2722555 1.515688e-04 1.478241e-02 1.194246e-01 5 179618208 179618217 10 - 2.109 2.044 -0.218
ENSG00000169045 E041 103.9093353 1.456090e-04 1.441340e-02 1.175887e-01 5 179618218 179618223 6 - 2.056 1.986 -0.234
ENSG00000169045 E042 97.2564855 1.468125e-04 3.662909e-04 8.246362e-03 5 179618224 179618235 12 - 2.046 1.939 -0.357
ENSG00000169045 E043 85.4500050 1.678553e-04 1.322533e-03 2.224588e-02 5 179618236 179618238 3 - 1.988 1.886 -0.344
ENSG00000169045 E044 182.3079537 8.086379e-05 1.217957e-04 3.459414e-03 5 179618239 179618323 85 - 2.305 2.222 -0.278
ENSG00000169045 E045 313.2644542 5.829143e-05 2.788471e-43 4.485721e-40 5 179618324 179619100 777 - 2.339 2.588 0.828
ENSG00000169045 E046 107.3421091 1.384299e-04 6.930612e-15 1.404269e-12 5 179619101 179619268 168 - 1.882 2.122 0.806
ENSG00000169045 E047 84.2441174 1.780040e-04 8.118797e-03 8.101399e-02 5 179619269 179619272 4 - 1.973 1.888 -0.284
ENSG00000169045 E048 120.9889040 3.613137e-04 9.591224e-04 1.741312e-02 5 179619273 179619300 28 - 2.132 2.041 -0.304
ENSG00000169045 E049 90.2715421 1.976532e-04 2.968267e-04 7.059742e-03 5 179619301 179619314 14 - 2.017 1.904 -0.379
ENSG00000169045 E050 116.1030751 1.292418e-04 3.166539e-06 1.554668e-04 5 179619315 179619360 46 - 2.132 2.004 -0.430
ENSG00000169045 E051 101.8243720 1.524105e-04 7.741715e-05 2.399163e-03 5 179619361 179619407 47 - 2.070 1.954 -0.389
ENSG00000169045 E052 37.1115311 5.137905e-03 1.668947e-03 2.649454e-02 5 179619408 179619468 61 - 1.465 1.651 0.637
ENSG00000169045 E053 147.0965663 6.214296e-04 1.368094e-14 2.699875e-12 5 179619469 179620037 569 - 2.034 2.250 0.723
ENSG00000169045 E054 190.9245866 8.473650e-05 9.040198e-25 3.933672e-22 5 179620038 179620674 637 - 2.132 2.370 0.794
ENSG00000169045 E055 39.7459794 1.011343e-02 3.565799e-04 8.096407e-03 5 179620675 179620732 58 - 1.461 1.696 0.803
ENSG00000169045 E056 43.4572688 9.197575e-03 5.184954e-04 1.082377e-02 5 179620733 179620772 40 - 1.508 1.730 0.754
ENSG00000169045 E057 48.6378391 7.321570e-03 7.053028e-05 2.210894e-03 5 179620773 179620813 41 - 1.548 1.782 0.794
ENSG00000169045 E058 42.5813840 4.312057e-03 8.052966e-05 2.476124e-03 5 179620814 179620891 78 - 1.501 1.720 0.746
ENSG00000169045 E059 63.4368408 2.088558e-04 1.886500e-02 1.389769e-01 5 179620892 179620896 5 - 1.852 1.766 -0.290
ENSG00000169045 E060 99.0109982 1.546912e-04 8.332615e-06 3.631734e-04 5 179620897 179620942 46 - 2.066 1.933 -0.446
ENSG00000169045 E061 122.4038782 1.322229e-04 8.398747e-07 4.883416e-05 5 179620943 179621010 68 - 2.157 2.025 -0.443
ENSG00000169045 E062 89.4936056 1.593702e-04 1.222868e-03 2.088594e-02 5 179621011 179621035 25 - 2.007 1.906 -0.338
ENSG00000169045 E063 47.4337410 1.002162e-03 2.710871e-03 3.790079e-02 5 179621036 179621241 206 - 1.598 1.739 0.478
ENSG00000169045 E064 83.5648494 1.780420e-04 4.995841e-04 1.054091e-02 5 179621242 179621253 12 - 1.983 1.871 -0.378
ENSG00000169045 E065 153.6970412 1.063079e-04 3.635954e-07 2.257523e-05 5 179621254 179621346 93 - 2.250 2.129 -0.407
ENSG00000169045 E066 67.3016640 2.663384e-03 1.240456e-05 5.108675e-04 5 179621347 179621370 24 - 1.924 1.741 -0.617
ENSG00000169045 E067 72.2872360 3.407759e-03 9.331268e-04 1.704024e-02 5 179621371 179621397 27 - 1.934 1.795 -0.470
ENSG00000169045 E068 99.0166294 7.886300e-03 4.641495e-06 2.172825e-04 5 179621398 179621842 445 - 1.855 2.084 0.768
ENSG00000169045 E069 32.4740376 2.816145e-03 1.985224e-03 3.025771e-02 5 179621843 179621950 108 - 1.412 1.593 0.620
ENSG00000169045 E070 16.0997919 1.219015e-03 4.459468e-04 9.650848e-03 5 179621951 179621976 26 - 1.061 1.330 0.957
ENSG00000169045 E071 2.2947547 6.323099e-03 2.786701e-02 1.765964e-01 5 179622849 179622951 103 - 0.306 0.631 1.679
ENSG00000169045 E072 2.2091436 1.981599e-01 8.780677e-01 9.613298e-01 5 179622952 179623036 85 - 0.519 0.492 -0.129
ENSG00000169045 E073 53.7900057 3.491958e-03 2.459028e-06 1.246800e-04 5 179623037 179623048 12 - 1.846 1.623 -0.754
ENSG00000169045 E074 80.0056321 1.831089e-04 5.353751e-10 5.639072e-08 5 179623049 179623164 116 - 2.009 1.801 -0.699
ENSG00000169045 E075 1.0953869 1.190599e-02 6.372140e-01 8.557720e-01 5 179623165 179623187 23 - 0.358 0.287 -0.451
ENSG00000169045 E076 0.6040042 2.134675e-01 6.129623e-01   5 179623188 179623280 93 - 0.247 0.167 -0.714
ENSG00000169045 E077 3.1459715 9.160320e-03 1.233519e-01 4.067999e-01 5 179623281 179623594 314 - 0.484 0.697 0.959
ENSG00000169045 E078 13.7376036 1.361612e-03 1.050981e-03 1.867404e-02 5 179623595 179623635 41 - 1.289 1.035 -0.906
ENSG00000169045 E079 17.4022686 8.343220e-04 4.864258e-02 2.434927e-01 5 179623636 179623977 342 - 1.332 1.197 -0.473
ENSG00000169045 E080 0.9981910 1.853539e-02 5.715548e-01 8.227177e-01 5 179623978 179624096 119 - 0.247 0.337 0.608
ENSG00000169045 E081 0.5253357 1.605182e-02 5.629574e-02   5 179624097 179624115 19 - 0.000 0.287 13.481
ENSG00000169045 E082 0.7703740 1.460111e-02 1.174353e-01 3.966260e-01 5 179624116 179624202 87 - 0.099 0.337 2.193
ENSG00000169045 E083 0.7535360 1.412109e-02 4.835920e-01 7.702310e-01 5 179624203 179624316 114 - 0.180 0.287 0.871
ENSG00000169045 E084 3.4999206 2.234241e-02 1.454348e-01 4.411574e-01 5 179624317 179624669 353 - 0.749 0.553 -0.839
ENSG00000169045 E085 0.1138060 1.127724e-02 4.888582e-01   5 179633892 179634064 173 - 0.099 0.000 -11.941
ENSG00000169045 E086 0.1308632 1.227934e-02 5.918386e-01   5 179634065 179634157 93 - 0.000 0.091 11.481
ENSG00000169045 E087 0.1311489 1.230717e-02 5.918030e-01   5 179634158 179634440 283 - 0.000 0.091 11.481
ENSG00000169045 E088 0.1311489 1.230717e-02 5.918030e-01   5 179634449 179634784 336 - 0.000 0.091 11.481

Help

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