ENSG00000008710

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

  • Note:

    • About the Coding Potential: Please check the spreadsheet in the “Results” tag to confirm the coding potential. The above figure only show the predicted coding potential. The “gene_biotype” in the result spreadsheet is from the database record. Therefore, if you find conflicts between “gene_biotype” and “codingPotential”, please trust the “gene_biotype”.

    • Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

    • For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000472577 ENSG00000008710 No_inf pgKDN_inf PKD1 protein_coding retained_intron 60.60341 65.81769 52.4892 2.951769 6.510434 -0.3263993 19.022685 20.4739037 18.300748 0.9351885 2.3431446 -0.1617999 0.31622500 0.311925 0.349075 0.037150 8.346783e-01 1.063144e-06 FALSE  
ENST00000472659 ENSG00000008710 No_inf pgKDN_inf PKD1 protein_coding retained_intron 60.60341 65.81769 52.4892 2.951769 6.510434 -0.3263993 2.453804 0.4053973 4.379887 0.4053973 2.1951356 3.4016202 0.04030000 0.006300 0.072875 0.066575 2.229681e-01 1.063144e-06 FALSE  
ENST00000567355 ENSG00000008710 No_inf pgKDN_inf PKD1 protein_coding retained_intron 60.60341 65.81769 52.4892 2.951769 6.510434 -0.3263993 4.970466 8.0177227 2.057986 0.9773605 1.0086476 -1.9567643 0.07975000 0.122550 0.039925 -0.082625 3.271092e-01 1.063144e-06    
ENST00000568796 ENSG00000008710 No_inf pgKDN_inf PKD1 protein_coding retained_intron 60.60341 65.81769 52.4892 2.951769 6.510434 -0.3263993 2.777843 5.7870544 0.000000 1.3324193 0.0000000 -9.1791762 0.04230833 0.087025 0.000000 -0.087025 1.063144e-06 1.063144e-06 FALSE  
MSTRG.10525.4 ENSG00000008710 No_inf pgKDN_inf PKD1 protein_coding   60.60341 65.81769 52.4892 2.951769 6.510434 -0.3263993 2.949387 2.8009281 2.608828 1.1366548 1.1205919 -0.1021253 0.05316667 0.044000 0.060775 0.016775 1.000000e+00 1.063144e-06 FALSE  
MSTRG.10525.6 ENSG00000008710 No_inf pgKDN_inf PKD1 protein_coding   60.60341 65.81769 52.4892 2.951769 6.510434 -0.3263993 3.730763 4.5650186 2.215105 1.0252166 0.8541458 -1.0399039 0.05985000 0.069500 0.039975 -0.029525 7.467349e-01 1.063144e-06 TRUE  
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

Help

Please Click HERE to learn more details about the results of IsoformSwitchAnalyzeR.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand pgKDN.inf No.inf log2fold_No.inf_pgKDN.inf
ENSG00000008710 E001 0.0000000       16 2088708 2088709 2 -      
ENSG00000008710 E002 0.0000000       16 2088710 2088713 4 -      
ENSG00000008710 E003 0.0000000       16 2088714 2088717 4 -      
ENSG00000008710 E004 5.3714126 0.0025719696 0.2682848127 0.561831531 16 2088718 2089526 809 - 0.866 0.743 -0.484
ENSG00000008710 E005 61.0599949 0.0002573204 0.2569534721 0.549209058 16 2089527 2089891 365 - 1.813 1.771 -0.140
ENSG00000008710 E006 18.1090353 0.0008775245 0.2690403219 0.562636700 16 2089892 2089935 44 - 1.318 1.244 -0.260
ENSG00000008710 E007 56.5991131 0.0203406125 0.8864314967 0.962011220 16 2089936 2090194 259 - 1.756 1.759 0.012
ENSG00000008710 E008 48.0928616 0.0003019935 0.4457311820 0.720125172 16 2090285 2090590 306 - 1.669 1.703 0.113
ENSG00000008710 E009 18.8061604 0.0007552542 0.6764895706 0.865925917 16 2090674 2090764 91 - 1.278 1.307 0.101
ENSG00000008710 E010 10.0774367 0.0013214100 0.8556300570 0.949167023 16 2090765 2090808 44 - 1.032 1.049 0.062
ENSG00000008710 E011 0.0000000       16 2090809 2090839 31 -      
ENSG00000008710 E012 0.0000000       16 2090883 2090883 1 -      
ENSG00000008710 E013 13.1587653 0.0010704274 0.7933886118 0.921206676 16 2090884 2090984 101 - 1.136 1.158 0.077
ENSG00000008710 E014 18.0464770 0.0007377676 0.8436572757 0.944147477 16 2090985 2091174 190 - 1.284 1.272 -0.044
ENSG00000008710 E015 2.0791478 0.0066390748 0.5784579542 0.811644434 16 2091423 2091427 5 - 0.529 0.449 -0.391
ENSG00000008710 E016 1.8251576 0.0074194878 0.2876206463 0.581124295 16 2091428 2091597 170 - 0.529 0.373 -0.806
ENSG00000008710 E017 5.2125591 0.0028084113 0.0471559162 0.213311011 16 2091781 2091822 42 - 0.647 0.879 0.937
ENSG00000008710 E018 9.2595435 0.0015298897 0.1955721880 0.475884971 16 2091823 2091854 32 - 0.938 1.058 0.445
ENSG00000008710 E019 12.6862029 0.0027235148 0.3811466366 0.667619834 16 2091855 2091906 52 - 1.092 1.164 0.260
ENSG00000008710 E020 0.3811266 0.0256424436 0.1383463347   16 2091907 2092045 139 - 0.000 0.225 14.078
ENSG00000008710 E021 0.1271363 0.0123287094 0.6270191949   16 2092046 2092046 1 - 0.000 0.089 12.644
ENSG00000008710 E022 17.6851233 0.0010325162 0.8121390184 0.930905698 16 2092047 2092188 142 - 1.259 1.277 0.061
ENSG00000008710 E023 12.7110224 0.0013099475 0.1380656919 0.395392929 16 2092480 2092592 113 - 1.063 1.184 0.435
ENSG00000008710 E024 2.1491416 0.0221337706 0.0003529310 0.006650597 16 2092593 2092626 34 - 0.102 0.665 3.779
ENSG00000008710 E025 4.2584708 0.0168066165 0.0009399693 0.014313917 16 2092627 2092885 259 - 0.412 0.866 2.002
ENSG00000008710 E026 0.0000000       16 2092886 2092953 68 -      
ENSG00000008710 E027 4.9938967 0.0044672572 0.1181491989 0.363091675 16 2092954 2093093 140 - 0.866 0.686 -0.718
ENSG00000008710 E028 3.5290104 0.0750503700 0.0006678026 0.010934203 16 2093355 2093543 189 - 0.254 0.824 2.838
ENSG00000008710 E029 23.0906923 0.0133124910 0.0802983825 0.290892864 16 2093544 2093738 195 - 1.447 1.317 -0.451
ENSG00000008710 E030 17.1056851 0.0214151847 0.7426920258 0.898327471 16 2093811 2094013 203 - 1.234 1.272 0.134
ENSG00000008710 E031 9.7551884 0.0014781031 0.2207659754 0.507723372 16 2094092 2094210 119 - 0.963 1.075 0.410
ENSG00000008710 E032 11.2992862 0.0012394667 0.9072842104 0.970539044 16 2097148 2097241 94 - 1.092 1.083 -0.032
ENSG00000008710 E033 16.5942316 0.0010558985 0.8260260102 0.936986284 16 2097319 2097503 185 - 1.233 1.250 0.058
ENSG00000008710 E034 0.1268540 0.0123059790 0.6270613970   16 2097504 2097519 16 - 0.000 0.089 12.645
ENSG00000008710 E035 6.1626166 0.0023072147 0.5612627464 0.801651041 16 2097728 2097751 24 - 0.816 0.879 0.245
ENSG00000008710 E036 6.1877314 0.0022047066 0.1508544746 0.413732926 16 2097752 2097777 26 - 0.760 0.917 0.609
ENSG00000008710 E037 3.4633980 0.0040368967 0.2700237495 0.563645054 16 2097778 2097780 3 - 0.561 0.706 0.627
ENSG00000008710 E038 0.0000000       16 2097781 2097851 71 -      
ENSG00000008710 E039 0.0000000       16 2097852 2097858 7 -      
ENSG00000008710 E040 0.0000000       16 2097859 2097867 9 -      
ENSG00000008710 E041 8.2492188 0.0017072029 0.6427067200 0.848561670 16 2097868 2097984 117 - 0.938 0.983 0.169
ENSG00000008710 E042 0.1268540 0.0123059790 0.6270613970   16 2097985 2098191 207 - 0.000 0.089 12.645
ENSG00000008710 E043 0.9590630 0.1073953746 0.1330096804 0.387288458 16 2098833 2099077 245 - 0.412 0.162 -1.805
ENSG00000008710 E044 0.6073254 0.0193160001 0.5393710367 0.787803648 16 2099078 2099461 384 - 0.254 0.162 -0.806
ENSG00000008710 E045 0.1272623 0.0123796851 0.6269347798   16 2099462 2099563 102 - 0.000 0.089 12.644
ENSG00000008710 E046 0.2537694 0.0160885130 0.2998319265   16 2099564 2099643 80 - 0.000 0.162 13.570
ENSG00000008710 E047 7.8443911 0.0026947966 0.5417903268 0.789342501 16 2099644 2099770 127 - 0.976 0.917 -0.221
ENSG00000008710 E048 8.4890147 0.0015926542 0.6605583834 0.858305769 16 2099861 2099931 71 - 0.951 0.993 0.158
ENSG00000008710 E049 11.6926890 0.0014663414 0.5649131502 0.804032983 16 2099932 2100022 91 - 1.073 1.122 0.177
ENSG00000008710 E050 10.6859911 0.0020469769 0.8527470961 0.948035823 16 2100023 2100071 49 - 1.073 1.058 -0.055
ENSG00000008710 E051 15.1029980 0.0009317045 0.8199454163 0.934550636 16 2100166 2100309 144 - 1.213 1.197 -0.056
ENSG00000008710 E052 0.0000000       16 2100310 2100395 86 -      
ENSG00000008710 E053 5.8636776 0.0041713229 0.2745607488 0.568152015 16 2100396 2100566 171 - 0.896 0.777 -0.462
ENSG00000008710 E054 0.4906372 0.1081252684 0.8887082265   16 2100567 2100765 199 - 0.184 0.162 -0.221
ENSG00000008710 E055 0.0000000       16 2101951 2102060 110 -      
ENSG00000008710 E056 5.6874282 0.0024873827 0.2131335468 0.498358828 16 2102061 2102256 196 - 0.740 0.879 0.550
ENSG00000008710 E057 0.1272623 0.0123796851 0.6269347798   16 2102380 2102380 1 - 0.000 0.089 12.644
ENSG00000008710 E058 2.8572269 0.0555863090 0.1815051901 0.457478357 16 2102381 2102398 18 - 0.455 0.665 0.972
ENSG00000008710 E059 13.7421055 0.0062534574 0.8141760275 0.932093690 16 2102399 2102633 235 - 1.176 1.158 -0.066
ENSG00000008710 E060 11.7840635 0.0018671815 0.8844810792 0.961093654 16 2102814 2102970 157 - 1.110 1.099 -0.040
ENSG00000008710 E061 0.0000000       16 2102971 2103104 134 -      
ENSG00000008710 E062 0.0000000       16 2103105 2103252 148 -      
ENSG00000008710 E063 0.0000000       16 2103253 2103265 13 -      
ENSG00000008710 E064 8.2875278 0.0017356528 0.1482621042 0.410007093 16 2103266 2103390 125 - 0.881 1.022 0.528
ENSG00000008710 E065 3.0872716 0.0046401093 0.5417404807 0.789297938 16 2103391 2103431 41 - 0.561 0.644 0.364
ENSG00000008710 E066 5.4978237 0.0025739160 0.3381013033 0.629948120 16 2103432 2103515 84 - 0.866 0.761 -0.413
ENSG00000008710 E067 4.0460821 0.0034672512 0.7879473019 0.918663609 16 2103516 2103516 1 - 0.718 0.686 -0.133
ENSG00000008710 E068 8.4431104 0.0022934846 0.4508733992 0.724089392 16 2103517 2103626 110 - 1.011 0.940 -0.263
ENSG00000008710 E069 6.1561055 0.0025957046 0.5607221716 0.801213678 16 2103627 2103724 98 - 0.816 0.879 0.245
ENSG00000008710 E070 4.6695887 0.0036332589 0.8649389596 0.953321594 16 2103725 2103788 64 - 0.740 0.761 0.084
ENSG00000008710 E071 7.1784727 0.0019475928 0.0440842798 0.205260749 16 2103789 2103895 107 - 1.011 0.809 -0.765
ENSG00000008710 E072 6.9722523 0.0020403280 0.3300674995 0.622573285 16 2104498 2104642 145 - 0.951 0.853 -0.373
ENSG00000008710 E073 0.2448930 0.0164476004 0.9043999789   16 2105322 2105356 35 - 0.102 0.089 -0.221
ENSG00000008710 E074 0.9709242 0.0117719787 0.3581040880 0.647642206 16 2105357 2105377 21 - 0.366 0.225 -0.958
ENSG00000008710 E075 6.9122562 0.0040358208 0.3132680996 0.606407407 16 2105378 2105474 97 - 0.833 0.940 0.407
ENSG00000008710 E076 2.3756927 0.0505871767 0.0392103008 0.191763368 16 2105475 2105662 188 - 0.313 0.644 1.687
ENSG00000008710 E077 0.3714026 0.0166468110 0.6839398487   16 2105663 2105707 45 - 0.102 0.162 0.779
ENSG00000008710 E078 0.6052820 0.0211493505 0.5396009598 0.787975844 16 2105708 2105864 157 - 0.253 0.162 -0.806
ENSG00000008710 E079 11.4356181 0.0223222176 0.8611634189 0.951853949 16 2105865 2106024 160 - 1.083 1.099 0.059
ENSG00000008710 E080 7.1484967 0.0487020475 0.4408853708 0.716528403 16 2106091 2106275 185 - 0.850 0.951 0.386
ENSG00000008710 E081 2.8639073 0.0299095458 0.0693863051 0.266278709 16 2106276 2106304 29 - 0.412 0.686 1.282
ENSG00000008710 E082 0.1271363 0.0123287094 0.6270191949   16 2106305 2106397 93 - 0.000 0.089 12.644
ENSG00000008710 E083 2.8557226 0.0050136308 0.1291543613 0.381301744 16 2106398 2106502 105 - 0.455 0.665 0.972
ENSG00000008710 E084 2.6030532 0.0054421795 0.2392067464 0.528138884 16 2106503 2106520 18 - 0.455 0.621 0.779
ENSG00000008710 E085 4.1790136 0.0033889003 0.8160170011 0.932776533 16 2106521 2106589 69 - 0.696 0.725 0.120
ENSG00000008710 E086 3.7947413 0.0338384529 0.8384784646 0.942106797 16 2106590 2106668 79 - 0.696 0.665 -0.127
ENSG00000008710 E087 1.9738879 0.0171043263 0.4986931289 0.759102371 16 2106669 2106677 9 - 0.413 0.514 0.516
ENSG00000008710 E088 0.0000000       16 2106678 2106753 76 -      
ENSG00000008710 E089 4.3519373 0.0039851397 0.0357948176 0.181478188 16 2106805 2106940 136 - 0.561 0.824 1.101
ENSG00000008710 E090 1.4992344 0.0122536649 0.1369745546 0.393962544 16 2106941 2106948 8 - 0.254 0.483 1.364
ENSG00000008710 E091 1.0040024 0.0995539345 0.0634343540 0.253483622 16 2106949 2107584 636 - 0.102 0.413 2.587
ENSG00000008710 E092 0.1265070 0.0123664858 0.6269051008   16 2107585 2107632 48 - 0.000 0.089 12.644
ENSG00000008710 E093 0.1187032 0.0118326789 0.4606395198   16 2107633 2107804 172 - 0.102 0.000 -13.774
ENSG00000008710 E094 0.1271363 0.0123287094 0.6270191949   16 2107805 2107882 78 - 0.000 0.089 12.644
ENSG00000008710 E095 6.6465447 0.0410438383 0.8824809201 0.960462636 16 2107883 2108032 150 - 0.866 0.892 0.101
ENSG00000008710 E096 6.0658712 0.0024298340 0.0259175189 0.148848415 16 2108252 2108358 107 - 0.963 0.725 -0.927
ENSG00000008710 E097 28.8053314 0.0057983689 0.0158040452 0.108846300 16 2108359 2109290 932 - 1.548 1.399 -0.515
ENSG00000008710 E098 3.0458638 0.0291403535 0.3604309455 0.650128177 16 2109291 2109350 60 - 0.672 0.543 -0.569
ENSG00000008710 E099 46.3097096 0.0003185552 0.0061370721 0.057444784 16 2109351 2111457 2107 - 1.733 1.617 -0.396
ENSG00000008710 E100 6.4702980 0.0162547060 0.3681613834 0.656658268 16 2111458 2111815 358 - 0.924 0.824 -0.384
ENSG00000008710 E101 0.6072630 0.0143869521 0.5370358094 0.786146219 16 2111816 2111871 56 - 0.253 0.162 -0.806
ENSG00000008710 E102 0.0000000       16 2112340 2112473 134 -      
ENSG00000008710 E103 3.6569222 0.0166119423 0.2710751163 0.564746806 16 2112788 2112963 176 - 0.740 0.596 -0.608
ENSG00000008710 E104 0.1176306 0.0117629926 0.4606311922   16 2112964 2113040 77 - 0.102 0.000 -13.775
ENSG00000008710 E105 0.0000000       16 2113041 2113059 19 -      
ENSG00000008710 E106 0.0000000       16 2113060 2113160 101 -      
ENSG00000008710 E107 0.0000000       16 2113161 2113292 132 -      
ENSG00000008710 E108 0.0000000       16 2113777 2114027 251 -      
ENSG00000008710 E109 0.0000000       16 2114028 2114169 142 -      
ENSG00000008710 E110 7.3506485 0.0105005821 0.5765564708 0.810527503 16 2114170 2114925 756 - 0.951 0.892 -0.221
ENSG00000008710 E111 2.4661962 0.0058510978 0.5852363983 0.815753556 16 2115378 2115625 248 - 0.493 0.571 0.364
ENSG00000008710 E112 0.4901032 0.0158788977 0.8783179817   16 2115992 2116118 127 - 0.184 0.162 -0.221
ENSG00000008710 E113 1.4786838 0.0088872633 0.7583980730 0.905143653 16 2116529 2116591 63 - 0.366 0.413 0.265
ENSG00000008710 E114 1.8402361 0.0083147298 0.9662821990 0.993124964 16 2116592 2116644 53 - 0.455 0.449 -0.028
ENSG00000008710 E115 0.9607268 0.0117146065 0.1000578483 0.330522740 16 2116833 2117016 184 - 0.413 0.162 -1.806
ENSG00000008710 E116 0.2363338 0.0156854690 0.1938363109   16 2117017 2117053 37 - 0.184 0.000 -14.684
ENSG00000008710 E117 2.8055316 0.1263387755 0.5134766916 0.770279306 16 2117489 2117672 184 - 0.647 0.514 -0.601
ENSG00000008710 E118 2.3448498 0.1450621987 0.6350166420 0.844051444 16 2117791 2118119 329 - 0.455 0.570 0.556
ENSG00000008710 E119 2.6015092 0.0629339690 0.3201289761 0.612964525 16 2118120 2118462 343 - 0.455 0.621 0.779
ENSG00000008710 E120 0.0000000       16 2118676 2118845 170 -      
ENSG00000008710 E121 0.0000000       16 2119114 2119185 72 -      
ENSG00000008710 E122 0.0000000       16 2119307 2119378 72 -      
ENSG00000008710 E123 0.5873458 0.0369064465 0.0142779614 0.101578219 16 2135475 2135908 434 - 0.366 0.000 -15.769

Help

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