ENSG00000021762

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

  • Note:

    • About the Coding Potential: Please check the spreadsheet in the “Results” tag to confirm the coding potential. The above figure only show the predicted coding potential. The “gene_biotype” in the result spreadsheet is from the database record. Therefore, if you find conflicts between “gene_biotype” and “codingPotential”, please trust the “gene_biotype”.

    • Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

    • For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000263650 ENSG00000021762 No_inf pgKDN_inf OSBPL5 protein_coding protein_coding 11.21016 20.34141 5.683808 0.8513039 0.9761792 -1.837663 4.3965986 7.918257 2.9736017 0.5636333 0.3849697 -1.409949 0.42232500 0.388975 0.566825 0.177850 0.678646368 0.003531955 FALSE TRUE
ENST00000348039 ENSG00000021762 No_inf pgKDN_inf OSBPL5 protein_coding protein_coding 11.21016 20.34141 5.683808 0.8513039 0.9761792 -1.837663 0.3295215 0.000000 0.5718863 0.0000000 0.5718863 5.862665 0.05270000 0.000000 0.119975 0.119975 0.697837325 0.003531955 FALSE TRUE
ENST00000498536 ENSG00000021762 No_inf pgKDN_inf OSBPL5 protein_coding retained_intron 11.21016 20.34141 5.683808 0.8513039 0.9761792 -1.837663 1.0531238 1.580863 0.6148334 0.9162462 0.6148334 -1.348266 0.08730833 0.075375 0.071425 -0.003950 0.963293465 0.003531955 FALSE FALSE
ENST00000525498 ENSG00000021762 No_inf pgKDN_inf OSBPL5 protein_coding protein_coding 11.21016 20.34141 5.683808 0.8513039 0.9761792 -1.837663 0.9461535 1.887527 0.2248275 1.1129753 0.2248275 -3.014447 0.09246667 0.089425 0.049375 -0.040050 0.906165145 0.003531955 FALSE TRUE
ENST00000532951 ENSG00000021762 No_inf pgKDN_inf OSBPL5 protein_coding retained_intron 11.21016 20.34141 5.683808 0.8513039 0.9761792 -1.837663 0.4720431 0.682720 0.2090608 0.6827200 0.2090608 -1.660941 0.05068333 0.035225 0.043475 0.008250 0.862337861 0.003531955   FALSE
MSTRG.4281.10 ENSG00000021762 No_inf pgKDN_inf OSBPL5 protein_coding   11.21016 20.34141 5.683808 0.8513039 0.9761792 -1.837663 1.6026002 4.106627 0.0000000 0.9445274 0.0000000 -8.685319 0.08775833 0.199125 0.000000 -0.199125 0.003531955 0.003531955   FALSE
MSTRG.4281.11 ENSG00000021762 No_inf pgKDN_inf OSBPL5 protein_coding   11.21016 20.34141 5.683808 0.8513039 0.9761792 -1.837663 0.7243317 1.569274 0.5554818 0.7847339 0.3913386 -1.481709 0.05484167 0.076650 0.079075 0.002425 1.000000000 0.003531955 FALSE FALSE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

Help

Please Click HERE to learn more details about the results of IsoformSwitchAnalyzeR.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand pgKDN.inf No.inf log2fold_No.inf_pgKDN.inf
ENSG00000021762 E001 0.0000000       11 3087107 3087115 9 -      
ENSG00000021762 E002 0.0000000       11 3087116 3087120 5 -      
ENSG00000021762 E003 3.7273287 0.022806572 0.41275942 0.69378421 11 3087121 3087378 258 - 0.701 0.581 -0.518
ENSG00000021762 E004 8.4071202 0.001617530 0.17543362 0.44942939 11 3087379 3087579 201 - 0.772 0.929 0.607
ENSG00000021762 E005 9.0406341 0.001514813 0.09710261 0.32452175 11 3087580 3087783 204 - 0.772 0.962 0.731
ENSG00000021762 E006 6.6441124 0.002416716 0.45298382 0.72586397 11 3087784 3087905 122 - 0.738 0.830 0.364
ENSG00000021762 E007 3.2493765 0.007287321 0.99568606 1.00000000 11 3087906 3087915 10 - 0.566 0.566 -0.004
ENSG00000021762 E008 8.4928442 0.001658716 0.93230053 0.98028418 11 3087916 3088000 85 - 0.912 0.901 -0.040
ENSG00000021762 E009 14.4626313 0.001018145 0.62184380 0.83699549 11 3088001 3088177 177 - 1.145 1.102 -0.156
ENSG00000021762 E010 11.1948841 0.004514945 0.01123034 0.08680095 11 3088178 3088343 166 - 0.772 1.059 1.085
ENSG00000021762 E011 8.7541024 0.001598672 0.73770984 0.89590776 11 3089846 3089948 103 - 0.887 0.922 0.134
ENSG00000021762 E012 7.0032356 0.002084937 0.76375304 0.90789836 11 3090558 3090696 139 - 0.804 0.838 0.134
ENSG00000021762 E013 0.0000000       11 3090697 3090722 26 -      
ENSG00000021762 E014 7.1016095 0.002481071 0.56819030 0.80574173 11 3092432 3092558 127 - 0.887 0.821 -0.255
ENSG00000021762 E015 17.5627857 0.013614311 0.41093099 0.69264179 11 3092867 3093052 186 - 1.244 1.174 -0.250
ENSG00000021762 E016 1.2603825 0.011468207 0.29373406 0.58720325 11 3093385 3093526 142 - 0.161 0.343 1.429
ENSG00000021762 E017 4.1157270 0.003549301 0.87539490 0.95747176 11 3093527 3093534 8 - 0.661 0.638 -0.097
ENSG00000021762 E018 12.0374148 0.001289787 0.04330706 0.20291225 11 3093535 3093663 129 - 1.172 0.993 -0.650
ENSG00000021762 E019 0.8882570 0.012103388 0.14033179 0.39866821 11 3093664 3093745 82 - 0.000 0.287 12.300
ENSG00000021762 E020 9.3185271 0.001977817 0.13072858 0.38351475 11 3093746 3093835 90 - 1.053 0.901 -0.564
ENSG00000021762 E021 9.3929025 0.001491991 0.34804642 0.63855277 11 3094237 3094334 98 - 0.861 0.962 0.383
ENSG00000021762 E022 1.2618583 0.193222339 0.38857354 0.67436448 11 3094335 3094879 545 - 0.161 0.344 1.430
ENSG00000021762 E023 7.6719962 0.001906492 0.04801366 0.21559978 11 3100158 3100256 99 - 0.661 0.908 0.987
ENSG00000021762 E024 4.8720046 0.004104247 0.99881705 1.00000000 11 3101603 3101699 97 - 0.701 0.700 -0.004
ENSG00000021762 E025 7.3707366 0.002137931 0.84544607 0.94508247 11 3102183 3102281 99 - 0.834 0.855 0.082
ENSG00000021762 E026 0.5081066 0.015665980 0.42073170 0.69993488 11 3103136 3103238 103 - 0.000 0.186 11.493
ENSG00000021762 E027 6.7246703 0.033967582 0.52316999 0.77663356 11 3103239 3103320 82 - 0.887 0.794 -0.363
ENSG00000021762 E028 5.7017187 0.032960566 0.12752977 0.37869243 11 3104193 3104251 59 - 0.912 0.700 -0.834
ENSG00000021762 E029 9.8348139 0.001572790 0.32284102 0.61568569 11 3104252 3104377 126 - 1.035 0.936 -0.367
ENSG00000021762 E030 11.4076678 0.001320899 0.19410793 0.47395712 11 3107263 3107455 193 - 0.912 1.043 0.488
ENSG00000021762 E031 3.5181849 0.049216103 0.30234442 0.59546771 11 3107771 3107789 19 - 0.446 0.625 0.845
ENSG00000021762 E032 10.1260076 0.021844838 0.69680083 0.87624463 11 3107790 3107945 156 - 0.935 0.981 0.172
ENSG00000021762 E033 6.1031167 0.008880056 0.58311641 0.81433116 11 3119547 3119631 85 - 0.834 0.765 -0.271
ENSG00000021762 E034 5.5069932 0.044963570 0.70840255 0.88178779 11 3119632 3120328 697 - 0.701 0.755 0.218
ENSG00000021762 E035 6.7427568 0.006850842 0.87215993 0.95629254 11 3120421 3120543 123 - 0.834 0.812 -0.084
ENSG00000021762 E036 5.5148258 0.002582212 0.42709668 0.70564286 11 3120544 3120607 64 - 0.661 0.765 0.429
ENSG00000021762 E037 3.0098037 0.004991784 0.44183699 0.71722006 11 3120608 3120624 17 - 0.446 0.566 0.581
ENSG00000021762 E038 0.0000000       11 3121804 3121805 2 -      
ENSG00000021762 E039 0.0000000       11 3121806 3121996 191 -      
ENSG00000021762 E040 3.0084178 0.086572688 0.57145638 0.80765515 11 3121997 3122025 29 - 0.445 0.566 0.582
ENSG00000021762 E041 3.2444042 0.098932319 0.88949647 0.96325942 11 3122026 3122066 41 - 0.566 0.566 -0.004
ENSG00000021762 E042 3.4994315 0.228096067 0.92245261 0.97609495 11 3122067 3122098 32 - 0.567 0.596 0.132
ENSG00000021762 E043 0.0000000       11 3122099 3122347 249 -      
ENSG00000021762 E044 2.8738203 0.321559101 0.86278321 0.95259886 11 3122348 3122353 6 - 0.511 0.532 0.104
ENSG00000021762 E045 3.7542385 0.066414261 0.77497363 0.91354128 11 3122354 3122378 25 - 0.566 0.625 0.259
ENSG00000021762 E046 4.7358284 0.003105599 0.64231156 0.84831676 11 3122379 3122428 50 - 0.738 0.677 -0.255
ENSG00000021762 E047 3.2577424 0.020054919 0.64526036 0.84985281 11 3126473 3126482 10 - 0.510 0.581 0.330
ENSG00000021762 E048 4.7388458 0.114521362 0.61223486 0.83126651 11 3126483 3126555 73 - 0.738 0.677 -0.255
ENSG00000021762 E049 0.1272623 0.012482757 1.00000000   11 3126556 3126644 89 - 0.000 0.055 9.493
ENSG00000021762 E050 6.1670423 0.063156037 0.03945621 0.19254211 11 3129013 3129169 157 - 0.998 0.700 -1.155
ENSG00000021762 E051 0.0000000       11 3129170 3129329 160 -      
ENSG00000021762 E052 0.0000000       11 3146180 3146661 482 -      
ENSG00000021762 E053 0.0000000       11 3160918 3161393 476 -      
ENSG00000021762 E054 0.1271363 0.012378697 1.00000000   11 3163940 3164423 484 - 0.000 0.055 9.493
ENSG00000021762 E055 1.7141620 0.052196242 0.04106735 0.19665079 11 3165216 3165222 7 - 0.616 0.287 -1.740
ENSG00000021762 E056 2.2148085 0.049957934 0.06584674 0.25850766 11 3165223 3165352 130 - 0.661 0.369 -1.418
ENSG00000021762 E057 0.0000000       11 3165511 3165770 260 -      
ENSG00000021762 E058 0.0000000       11 3166625 3166739 115 -      

Help

Please Click HERE to learn more details about the results from DEXseq.