ENSG00000092148

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

  • Note:

    • About the Coding Potential: Please check the spreadsheet in the “Results” tag to confirm the coding potential. The above figure only show the predicted coding potential. The “gene_biotype” in the result spreadsheet is from the database record. Therefore, if you find conflicts between “gene_biotype” and “codingPotential”, please trust the “gene_biotype”.

    • Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

    • For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000554027 ENSG00000092148 No_inf pgKDN_inf HECTD1 protein_coding retained_intron 33.14894 30.88379 35.31254 0.6269541 2.895462 0.1932722 3.856485 1.439333 5.323560 0.8451940 0.8443316 1.8797094 0.10859167 0.04510 0.149425 0.104325 0.3192635088 0.0004623312   FALSE
ENST00000555843 ENSG00000092148 No_inf pgKDN_inf HECTD1 protein_coding retained_intron 33.14894 30.88379 35.31254 0.6269541 2.895462 0.1932722 1.830145 2.345223 1.193786 0.4761645 0.3335876 -0.9682844 0.05643333 0.07565 0.035125 -0.040525 0.5950913619 0.0004623312 FALSE TRUE
ENST00000556004 ENSG00000092148 No_inf pgKDN_inf HECTD1 protein_coding retained_intron 33.14894 30.88379 35.31254 0.6269541 2.895462 0.1932722 1.523475 0.000000 3.971862 0.0000000 1.5026105 8.6372994 0.04035833 0.00000 0.105550 0.105550 0.0004623312 0.0004623312 FALSE TRUE
ENST00000692132 ENSG00000092148 No_inf pgKDN_inf HECTD1 protein_coding retained_intron 33.14894 30.88379 35.31254 0.6269541 2.895462 0.1932722 9.704304 8.730048 11.004749 0.7223322 0.5685470 0.3337234 0.29668333 0.28395 0.318150 0.034200 0.8843668623 0.0004623312 FALSE TRUE
ENST00000693537 ENSG00000092148 No_inf pgKDN_inf HECTD1 protein_coding retained_intron 33.14894 30.88379 35.31254 0.6269541 2.895462 0.1932722 6.725188 9.534692 4.459356 1.4542189 1.8059432 -1.0946316 0.20699167 0.30825 0.123725 -0.184525 0.4569578450 0.0004623312 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

Help

Please Click HERE to learn more details about the results of IsoformSwitchAnalyzeR.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand pgKDN.inf No.inf log2fold_No.inf_pgKDN.inf
ENSG00000092148 E001 0.0000000       14 31100117 31100117 1 -      
ENSG00000092148 E002 0.0000000       14 31100118 31100118 1 -      
ENSG00000092148 E003 0.0000000       14 31100119 31100119 1 -      
ENSG00000092148 E004 0.7619374 0.0264490864 0.009098517 0.07555341 14 31100120 31100137 18 - 0.000 0.398 13.427
ENSG00000092148 E005 0.8890737 0.0157457204 0.004032976 0.04267982 14 31100138 31100143 6 - 0.000 0.439 16.242
ENSG00000092148 E006 1.2621755 0.0402910922 0.008346977 0.07115313 14 31100144 31100146 3 - 0.093 0.512 3.227
ENSG00000092148 E007 3.2125247 0.1560212462 0.442928930 0.71809688 14 31100147 31100177 31 - 0.531 0.699 0.736
ENSG00000092148 E008 12.0949492 0.0032361280 0.034110462 0.17606600 14 31100178 31100252 75 - 1.015 1.197 0.654
ENSG00000092148 E009 64.1081688 0.0002424432 0.018695229 0.12135136 14 31100253 31100596 344 - 1.766 1.855 0.301
ENSG00000092148 E010 84.1273615 0.0002241611 0.000411179 0.00748196 14 31100597 31101067 471 - 1.868 1.983 0.388
ENSG00000092148 E011 15.7520735 0.0358632485 0.252855133 0.54415006 14 31101180 31101223 44 - 1.160 1.278 0.419
ENSG00000092148 E012 25.1462471 0.0005917348 0.005822978 0.05523076 14 31101224 31101324 101 - 1.325 1.491 0.572
ENSG00000092148 E013 1.5948065 0.0091830012 0.740646152 0.89714860 14 31101325 31102189 865 - 0.387 0.439 0.280
ENSG00000092148 E014 0.1272623 0.0123717146 0.522114272   14 31102788 31102915 128 - 0.000 0.097 13.695
ENSG00000092148 E015 32.0986556 0.0048038631 0.831135175 0.93899002 14 31102916 31103066 151 - 1.511 1.528 0.057
ENSG00000092148 E016 0.0000000       14 31103067 31103703 637 -      
ENSG00000092148 E017 23.4372215 0.0079486989 0.531367635 0.78200685 14 31105383 31105476 94 - 1.363 1.410 0.163
ENSG00000092148 E018 0.2372762 0.3234463125 0.324242905   14 31105477 31105589 113 - 0.170 0.000 -14.688
ENSG00000092148 E019 16.3319704 0.0008918615 0.337921469 0.62974947 14 31105590 31105668 79 - 1.201 1.272 0.253
ENSG00000092148 E020 0.2541163 0.0160336218 0.232107351   14 31105669 31105942 274 - 0.000 0.176 14.626
ENSG00000092148 E021 70.2244560 0.0002322704 0.830504970 0.93859900 14 31106646 31107253 608 - 1.855 1.851 -0.013
ENSG00000092148 E022 20.9730560 0.0007504980 0.371026579 0.65908243 14 31107567 31107704 138 - 1.310 1.371 0.209
ENSG00000092148 E023 0.2457744 0.0165821210 0.981011698   14 31109124 31109396 273 - 0.093 0.097 0.057
ENSG00000092148 E024 22.6267050 0.0025264240 0.056519339 0.23722288 14 31109397 31109598 202 - 1.430 1.311 -0.412
ENSG00000092148 E025 15.6263919 0.0226825063 0.673617721 0.86487724 14 31112416 31112543 128 - 1.238 1.204 -0.123
ENSG00000092148 E026 13.8153236 0.0167649518 0.930988301 0.97985955 14 31113104 31113189 86 - 1.174 1.168 -0.019
ENSG00000092148 E027 21.8180331 0.0040598334 0.119613549 0.36555062 14 31113277 31113484 208 - 1.406 1.306 -0.348
ENSG00000092148 E028 17.6469333 0.0166691492 0.172888906 0.44586489 14 31113877 31114059 183 - 1.325 1.210 -0.404
ENSG00000092148 E029 0.2539903 0.0160198345 0.232135804   14 31114060 31114285 226 - 0.000 0.176 14.627
ENSG00000092148 E030 8.5718539 0.0118521345 0.914073701 0.97292808 14 31114286 31114340 55 - 0.973 0.988 0.057
ENSG00000092148 E031 1.4768311 0.0442731804 0.553000583 0.79630312 14 31114341 31115632 1292 - 0.342 0.439 0.543
ENSG00000092148 E032 12.5310372 0.0144482917 0.419692192 0.69915811 14 31116236 31116320 85 - 1.089 1.168 0.284
ENSG00000092148 E033 14.8126392 0.0286883134 0.980016590 0.99770971 14 31116321 31116458 138 - 1.194 1.204 0.033
ENSG00000092148 E034 0.0000000       14 31116459 31116655 197 -      
ENSG00000092148 E035 10.5157464 0.0215853022 0.938403195 0.98223255 14 31119710 31119769 60 - 1.063 1.060 -0.010
ENSG00000092148 E036 14.0374139 0.0068856770 0.539532698 0.78797575 14 31119770 31119866 97 - 1.201 1.153 -0.169
ENSG00000092148 E037 14.3590498 0.0021636668 0.100709522 0.33125983 14 31121383 31121505 123 - 1.244 1.122 -0.437
ENSG00000092148 E038 1.1073110 0.1156010706 0.728550872 0.89176095 14 31121506 31121643 138 - 0.292 0.352 0.379
ENSG00000092148 E039 5.6979564 0.0140737409 0.092044139 0.31512201 14 31122914 31122919 6 - 0.914 0.720 -0.762
ENSG00000092148 E040 11.4648938 0.0397206970 0.537309494 0.78636135 14 31122920 31123047 128 - 1.130 1.060 -0.250
ENSG00000092148 E041 2.2190371 0.0678112229 0.378176591 0.66526604 14 31123048 31123515 468 - 0.428 0.574 0.709
ENSG00000092148 E042 0.7439674 0.0138612601 0.392749159 0.67775431 14 31123516 31123624 109 - 0.170 0.301 1.057
ENSG00000092148 E043 0.3712766 0.2162823163 0.613652267   14 31123625 31123670 46 - 0.093 0.176 1.058
ENSG00000092148 E044 2.7216244 0.0595349726 0.248851746 0.53969078 14 31126213 31127410 1198 - 0.465 0.653 0.865
ENSG00000092148 E045 0.1176306 0.0117708661 0.554726704   14 31127411 31127518 108 - 0.093 0.000 -14.428
ENSG00000092148 E046 0.2362687 0.0157754236 0.252922041   14 31127519 31127784 266 - 0.170 0.000 -15.349
ENSG00000092148 E047 16.0835787 0.0027215445 0.131267338 0.38435912 14 31127785 31128006 222 - 1.284 1.176 -0.383
ENSG00000092148 E048 0.9908491 0.2124843775 0.474190163 0.74092103 14 31128007 31128371 365 - 0.236 0.352 0.793
ENSG00000092148 E049 0.8781246 0.0123601356 0.045313624 0.20817248 14 31128372 31128611 240 - 0.093 0.398 2.642
ENSG00000092148 E050 21.9984407 0.0006303286 0.593730771 0.82112227 14 31128612 31129307 696 - 1.377 1.347 -0.103
ENSG00000092148 E051 0.0000000       14 31129308 31129448 141 -      
ENSG00000092148 E052 1.0148254 0.0481936582 0.002530529 0.03040355 14 31129449 31131952 2504 - 0.000 0.477 16.309
ENSG00000092148 E053 8.5190669 0.0016180429 0.195246222 0.47550842 14 31133238 31133414 177 - 1.035 0.916 -0.442
ENSG00000092148 E054 9.4732536 0.0014694578 0.058307443 0.24179253 14 31133509 31133675 167 - 1.098 0.929 -0.621
ENSG00000092148 E055 4.3346220 0.0046351249 0.010098125 0.08082720 14 31134872 31134942 71 - 0.860 0.544 -1.321
ENSG00000092148 E056 12.1606357 0.0011837861 0.102059458 0.33380684 14 31134943 31135195 253 - 1.181 1.051 -0.468
ENSG00000092148 E057 3.0208389 0.0045359135 0.085147300 0.30173026 14 31135476 31135541 66 - 0.706 0.477 -1.030
ENSG00000092148 E058 4.6977407 0.0029283747 0.008230345 0.07042653 14 31135542 31135615 74 - 0.888 0.574 -1.291
ENSG00000092148 E059 8.4725180 0.0015958048 0.012373114 0.09213593 14 31136531 31136665 135 - 1.081 0.845 -0.881
ENSG00000092148 E060 0.5083889 0.0158565571 0.041956603 0.19932066 14 31136666 31136838 173 - 0.000 0.301 15.538
ENSG00000092148 E061 5.7203946 0.0060196273 0.239018113 0.52793101 14 31139892 31139997 106 - 0.888 0.759 -0.502
ENSG00000092148 E062 4.2842089 0.0036040597 0.940810588 0.98323247 14 31141858 31141952 95 - 0.726 0.720 -0.025
ENSG00000092148 E063 7.1715142 0.0021392186 0.193415062 0.47315499 14 31144111 31144257 147 - 0.973 0.845 -0.487
ENSG00000092148 E064 8.2632537 0.0370842445 0.193004544 0.47280090 14 31144807 31144941 135 - 1.035 0.889 -0.545
ENSG00000092148 E065 5.1517872 0.0046214939 0.689630341 0.87242259 14 31148721 31148797 77 - 0.763 0.812 0.195
ENSG00000092148 E066 12.0797412 0.0011257427 0.457276717 0.72925110 14 31148897 31149160 264 - 1.145 1.088 -0.206
ENSG00000092148 E067 2.3210274 0.0060205010 0.874846915 0.95715664 14 31149999 31150021 23 - 0.531 0.511 -0.095
ENSG00000092148 E068 4.3909612 0.0171225833 0.600542380 0.82509275 14 31150022 31150069 48 - 0.763 0.699 -0.265
ENSG00000092148 E069 5.9801654 0.0315987002 0.610767525 0.83068427 14 31150070 31150181 112 - 0.874 0.812 -0.238
ENSG00000092148 E070 3.1934277 0.0682878152 0.705219176 0.88018006 14 31150182 31150221 40 - 0.589 0.653 0.280
ENSG00000092148 E071 6.7211675 0.0049025921 0.777703700 0.91472405 14 31156840 31157010 171 - 0.901 0.875 -0.100
ENSG00000092148 E072 5.1177010 0.0043873867 0.418352260 0.69799576 14 31157165 31157303 139 - 0.830 0.740 -0.358
ENSG00000092148 E073 0.1186381 0.0119931382 0.554536089   14 31162593 31162674 82 - 0.093 0.000 -14.427
ENSG00000092148 E074 6.5549387 0.0185438141 0.172420888 0.44522182 14 31168298 31168472 175 - 0.950 0.795 -0.595
ENSG00000092148 E075 0.0000000       14 31169156 31169353 198 -      
ENSG00000092148 E076 4.6315352 0.0044443542 0.387561326 0.67334549 14 31169354 31169468 115 - 0.798 0.699 -0.402
ENSG00000092148 E077 3.3206775 0.0041920806 0.514702590 0.77114051 14 31171861 31171959 99 - 0.589 0.676 0.379
ENSG00000092148 E078 2.6841501 0.0052722749 0.727737986 0.89131928 14 31172046 31172122 77 - 0.589 0.544 -0.206
ENSG00000092148 E079 0.3720642 0.0166486358 0.564582855   14 31172954 31173155 202 - 0.093 0.176 1.057
ENSG00000092148 E080 10.1217608 0.0344345104 0.669938540 0.86292666 14 31173156 31173426 271 - 1.072 1.021 -0.186
ENSG00000092148 E081 6.7621387 0.0398073070 0.416026160 0.69600128 14 31173525 31173806 282 - 0.830 0.941 0.426
ENSG00000092148 E082 0.3811266 0.0296052039 0.099216550   14 31173807 31174910 1104 - 0.000 0.243 15.120
ENSG00000092148 E083 8.6383294 0.0312954614 0.233178610 0.52194460 14 31174911 31175138 228 - 1.045 0.916 -0.478
ENSG00000092148 E084 2.2222746 0.0834143229 0.384357760 0.67050333 14 31178020 31178064 45 - 0.428 0.574 0.709
ENSG00000092148 E085 6.8429413 0.0078844785 0.891587795 0.96397434 14 31178065 31178254 190 - 0.901 0.889 -0.046
ENSG00000092148 E086 0.1271363 0.0123400517 0.522136915   14 31178933 31178978 46 - 0.000 0.097 13.696
ENSG00000092148 E087 0.2533610 0.0160138813 0.232122154   14 31185602 31185719 118 - 0.000 0.176 14.627
ENSG00000092148 E088 0.1265070 0.0123139787 0.522123165   14 31203071 31203636 566 - 0.000 0.097 13.696
ENSG00000092148 E089 3.8757012 0.0273656604 0.233099612 0.52184705 14 31205797 31205957 161 - 0.763 0.602 -0.679
ENSG00000092148 E090 0.1186381 0.0119931382 0.554536089   14 31205958 31206176 219 - 0.093 0.000 -14.427
ENSG00000092148 E091 2.6801266 0.0261437811 0.751985147 0.90238733 14 31207016 31207390 375 - 0.589 0.544 -0.205
ENSG00000092148 E092 2.0791827 0.0074096976 0.860569098 0.95168581 14 31207391 31207804 414 - 0.500 0.477 -0.113

Help

Please Click HERE to learn more details about the results from DEXseq.