ENSG00000100364

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

  • Note:

    • About the Coding Potential: Please check the spreadsheet in the “Results” tag to confirm the coding potential. The above figure only show the predicted coding potential. The “gene_biotype” in the result spreadsheet is from the database record. Therefore, if you find conflicts between “gene_biotype” and “codingPotential”, please trust the “gene_biotype”.

    • Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

    • For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000336156 ENSG00000100364 No_inf pgKDN_inf KIAA0930 protein_coding protein_coding 89.81886 79.42402 99.07334 2.005415 2.008999 0.3188855 21.46209 20.88225 24.17261 0.4395406 0.5308093 0.2110023 0.2402417 0.263725 0.244125 -0.019600 8.704821e-01 3.97339e-08 FALSE TRUE
ENST00000391627 ENSG00000100364 No_inf pgKDN_inf KIAA0930 protein_coding protein_coding 89.81886 79.42402 99.07334 2.005415 2.008999 0.3188855 34.82152 17.42961 51.82596 1.2788643 2.1174983 1.5715854 0.3766917 0.220975 0.522775 0.301800 3.973390e-08 3.97339e-08 FALSE TRUE
ENST00000423262 ENSG00000100364 No_inf pgKDN_inf KIAA0930 protein_coding protein_coding 89.81886 79.42402 99.07334 2.005415 2.008999 0.3188855 22.13299 27.14675 16.30383 2.0277658 1.4294616 -0.7352152 0.2537417 0.343075 0.165350 -0.177725 8.400251e-03 3.97339e-08 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

Help

Please Click HERE to learn more details about the results of IsoformSwitchAnalyzeR.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand pgKDN.inf No.inf log2fold_No.inf_pgKDN.inf
ENSG00000100364 E001 2.0920213 7.575255e-02 3.888247e-01 6.747168e-01 22 45191302 45191418 117 - 0.415 0.559 0.711
ENSG00000100364 E002 4.4455880 3.150263e-03 8.623912e-02 3.042997e-01 22 45192009 45192243 235 - 0.623 0.830 0.848
ENSG00000100364 E003 451.5589483 7.665722e-05 1.046033e-17 2.274868e-15 22 45192244 45195827 3584 - 2.597 2.710 0.376
ENSG00000100364 E004 65.9830635 2.274841e-04 9.331661e-01 9.806873e-01 22 45195828 45196037 210 - 1.824 1.828 0.014
ENSG00000100364 E005 351.8371836 1.089691e-04 8.809603e-03 7.384786e-02 22 45196038 45196701 664 - 2.527 2.568 0.137
ENSG00000100364 E006 69.5015842 2.401296e-04 8.292105e-01 9.382316e-01 22 45196702 45196748 47 - 1.851 1.844 -0.022
ENSG00000100364 E007 104.2621745 1.805315e-04 5.532278e-01 7.963539e-01 22 45196749 45196963 215 - 2.030 2.014 -0.055
ENSG00000100364 E008 71.6276971 2.195976e-04 4.086068e-01 6.908708e-01 22 45196964 45197105 142 - 1.874 1.846 -0.095
ENSG00000100364 E009 78.0193124 7.511460e-04 1.133174e-01 3.540733e-01 22 45197106 45197216 111 - 1.923 1.868 -0.185
ENSG00000100364 E010 125.9048119 5.695381e-04 2.613626e-01 5.540793e-01 22 45197790 45197948 159 - 2.118 2.087 -0.101
ENSG00000100364 E011 0.4986650 2.669601e-02 2.623769e-01   22 45197949 45198033 85 - 0.089 0.252 1.781
ENSG00000100364 E012 118.2532376 2.837027e-03 4.491463e-01 7.229827e-01 22 45199873 45200035 163 - 2.063 2.090 0.092
ENSG00000100364 E013 0.5080420 1.581123e-02 3.282145e-02 1.717299e-01 22 45200036 45200209 174 - 0.000 0.311 11.510
ENSG00000100364 E014 0.4985061 2.830080e-02 2.626632e-01   22 45202563 45202593 31 - 0.089 0.252 1.781
ENSG00000100364 E015 0.3723461 2.291611e-01 5.576765e-01   22 45202594 45202715 122 - 0.089 0.183 1.196
ENSG00000100364 E016 96.3278623 1.688328e-04 1.391238e-02 9.958197e-02 22 45202990 45203130 141 - 2.022 1.948 -0.249
ENSG00000100364 E017 57.9088623 2.551622e-04 2.427986e-01 5.324509e-01 22 45203131 45203184 54 - 1.791 1.746 -0.152
ENSG00000100364 E018 87.3966094 1.935090e-04 6.353068e-02 2.536243e-01 22 45203845 45203985 141 - 1.973 1.915 -0.197
ENSG00000100364 E019 28.2007111 6.877584e-04 2.396086e-02 1.417779e-01 22 45205217 45205220 4 - 1.522 1.395 -0.436
ENSG00000100364 E020 27.6054964 1.197567e-03 3.772349e-02 1.873806e-01 22 45205221 45205222 2 - 1.510 1.391 -0.410
ENSG00000100364 E021 43.8085851 4.481156e-04 2.717580e-02 1.532517e-01 22 45205223 45205259 37 - 1.696 1.597 -0.339
ENSG00000100364 E022 61.1693093 2.630642e-04 3.320332e-03 3.729472e-02 22 45205260 45205318 59 - 1.844 1.732 -0.379
ENSG00000100364 E023 43.4507448 3.297256e-04 3.754168e-02 1.867872e-01 22 45205630 45205641 12 - 1.690 1.597 -0.318
ENSG00000100364 E024 61.7586410 2.356626e-04 5.354909e-02 2.304236e-01 22 45205642 45205707 66 - 1.831 1.758 -0.246
ENSG00000100364 E025 63.0576924 2.207191e-04 2.269086e-02 1.371675e-01 22 45205793 45205883 91 - 1.845 1.760 -0.287
ENSG00000100364 E026 28.2113568 5.130222e-04 6.109744e-02 2.482469e-01 22 45205884 45205912 29 - 1.513 1.409 -0.358
ENSG00000100364 E027 0.8794764 2.462174e-02 3.503860e-02 1.791423e-01 22 45207573 45207772 200 - 0.089 0.410 2.781
ENSG00000100364 E028 0.2435110 1.643468e-02 9.178078e-01   22 45211334 45211334 1 - 0.089 0.101 0.196
ENSG00000100364 E029 0.7319150 5.482702e-02 8.775685e-01 9.584351e-01 22 45211335 45211432 98 - 0.227 0.252 0.196
ENSG00000100364 E030 50.9706616 2.862435e-04 1.603311e-02 1.098070e-01 22 45211956 45212107 152 - 1.761 1.661 -0.340
ENSG00000100364 E031 1.8435392 8.590945e-03 6.104600e-01 8.306795e-01 22 45212108 45212264 157 - 0.415 0.491 0.389
ENSG00000100364 E032 1.2297335 2.318233e-01 5.231195e-01 7.766227e-01 22 45212265 45212488 224 - 0.282 0.410 0.782
ENSG00000100364 E033 0.3712766 2.264659e-01 5.603983e-01   22 45213321 45213499 179 - 0.089 0.183 1.197
ENSG00000100364 E034 0.2441403 1.635197e-02 9.176812e-01   22 45226152 45226383 232 - 0.089 0.101 0.196
ENSG00000100364 E035 0.0000000       22 45226780 45226903 124 -      
ENSG00000100364 E036 2.0026816 1.636321e-02 5.618535e-03 5.391035e-02 22 45235249 45235431 183 - 0.227 0.644 2.311
ENSG00000100364 E037 0.1271363 1.232982e-02 4.709610e-01   22 45236170 45236277 108 - 0.000 0.101 9.602
ENSG00000100364 E038 33.1951020 1.175891e-03 2.956857e-02 1.616247e-01 22 45240640 45240894 255 - 1.586 1.471 -0.393

Help

Please Click HERE to learn more details about the results from DEXseq.