ENSG00000100697

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

  • Note:

    • About the Coding Potential: Please check the spreadsheet in the “Results” tag to confirm the coding potential. The above figure only show the predicted coding potential. The “gene_biotype” in the result spreadsheet is from the database record. Therefore, if you find conflicts between “gene_biotype” and “codingPotential”, please trust the “gene_biotype”.

    • Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

    • For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000343455 ENSG00000100697 No_inf pgKDN_inf DICER1 protein_coding protein_coding 8.820907 6.026785 12.51639 0.2395056 1.779454 1.053118 3.4308407 2.1005193 3.4139231 1.2135548 1.97653415 0.69805225 0.46150000 0.374200 0.362900 -0.011300 1.00000000 0.02063264 FALSE TRUE
ENST00000526495 ENSG00000100697 No_inf pgKDN_inf DICER1 protein_coding protein_coding 8.820907 6.026785 12.51639 0.2395056 1.779454 1.053118 0.9386860 1.3642053 1.4518527 1.3642053 1.45185274 0.08920043 0.10549167 0.212775 0.103700 -0.109075 0.96881552 0.02063264 FALSE TRUE
ENST00000527416 ENSG00000100697 No_inf pgKDN_inf DICER1 protein_coding protein_coding_CDS_not_defined 8.820907 6.026785 12.51639 0.2395056 1.779454 1.053118 2.1744206 0.0000000 5.2585784 0.0000000 1.75719815 9.04126993 0.15770833 0.000000 0.367950 0.367950 0.02063264 0.02063264 FALSE TRUE
ENST00000529720 ENSG00000100697 No_inf pgKDN_inf DICER1 protein_coding protein_coding 8.820907 6.026785 12.51639 0.2395056 1.779454 1.053118 1.0542796 1.3492384 1.8136006 1.3492384 1.81360056 0.42399129 0.11113333 0.208800 0.124600 -0.084200 0.97151303 0.02063264 FALSE TRUE
ENST00000696920 ENSG00000100697 No_inf pgKDN_inf DICER1 protein_coding retained_intron 8.820907 6.026785 12.51639 0.2395056 1.779454 1.053118 0.2420146 0.3993827 0.1033945 0.1677114 0.06150394 -1.85209946 0.03428333 0.067550 0.007225 -0.060325 0.34294446 0.02063264 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

Help

Please Click HERE to learn more details about the results of IsoformSwitchAnalyzeR.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand pgKDN.inf No.inf log2fold_No.inf_pgKDN.inf
ENSG00000100697 E001 0.7343008 0.7886028318 9.358083e-01 9.816054e-01 14 95086228 95086242 15 - 0.228 0.251 0.179
ENSG00000100697 E002 0.7343008 0.7886028318 9.358083e-01 9.816054e-01 14 95086243 95086243 1 - 0.228 0.251 0.179
ENSG00000100697 E003 1.2072842 0.0777653141 3.063599e-01 5.995361e-01 14 95086244 95086257 14 - 0.417 0.251 -1.046
ENSG00000100697 E004 14.7016360 0.0009928307 4.910248e-01 7.534902e-01 14 95086258 95086503 246 - 1.171 1.220 0.176
ENSG00000100697 E005 138.8884131 0.0002512445 1.913486e-07 1.047736e-05 14 95086504 95088664 2161 - 2.087 2.200 0.378
ENSG00000100697 E006 18.7849641 0.0007521437 6.049256e-01 8.277789e-01 14 95088665 95089008 344 - 1.313 1.278 -0.125
ENSG00000100697 E007 11.4215207 0.0051225289 2.274479e-01 5.158393e-01 14 95089009 95089246 238 - 1.143 1.037 -0.383
ENSG00000100697 E008 2.8026325 0.0053893918 7.453078e-01 8.992311e-01 14 95089247 95089269 23 - 0.601 0.557 -0.202
ENSG00000100697 E009 17.4848199 0.0009413960 7.416956e-01 8.976642e-01 14 95089270 95089638 369 - 1.256 1.278 0.075
ENSG00000100697 E010 27.7316966 0.0068745832 8.701705e-01 9.552531e-01 14 95089639 95090320 682 - 1.464 1.452 -0.040
ENSG00000100697 E011 10.3946499 0.0026721323 6.446553e-01 8.495123e-01 14 95090321 95090431 111 - 1.037 1.077 0.142
ENSG00000100697 E012 8.9765747 0.0015174408 1.132697e-01 3.539654e-01 14 95090432 95090491 60 - 0.923 1.067 0.534
ENSG00000100697 E013 4.8019409 0.0031660759 2.372348e-01 5.261760e-01 14 95090492 95090502 11 - 0.691 0.828 0.548
ENSG00000100697 E014 3.8210417 0.0037243085 2.162847e-01 5.023730e-01 14 95090503 95090512 10 - 0.601 0.755 0.646
ENSG00000100697 E015 5.1448850 0.0029652649 6.864011e-01 8.704721e-01 14 95090513 95090536 24 - 0.766 0.810 0.176
ENSG00000100697 E016 9.5139099 0.0497981955 9.109163e-01 9.717870e-01 14 95090537 95090663 127 - 1.037 1.005 -0.120
ENSG00000100697 E017 0.2435110 0.0162702341 9.229163e-01   14 95090664 95090664 1 - 0.090 0.100 0.176
ENSG00000100697 E018 0.3706473 0.0165438431 5.094265e-01   14 95090665 95091033 369 - 0.090 0.182 1.176
ENSG00000100697 E019 6.4574106 0.0022395109 6.135365e-01 8.320252e-01 14 95091034 95091109 76 - 0.898 0.844 -0.207
ENSG00000100697 E020 10.3468378 0.0013653495 2.921307e-01 5.856078e-01 14 95091203 95091360 158 - 1.097 1.005 -0.338
ENSG00000100697 E021 3.0783619 0.0050675256 3.669561e-01 6.556921e-01 14 95091361 95091365 5 - 0.548 0.667 0.524
ENSG00000100697 E022 1.6390244 0.0105727636 5.213706e-04 9.023163e-03 14 95091366 95092568 1203 - 0.090 0.615 3.761
ENSG00000100697 E023 0.1265070 0.0122622479 4.745983e-01   14 95092569 95092593 25 - 0.000 0.100 11.872
ENSG00000100697 E024 0.1265070 0.0122622479 4.745983e-01   14 95092594 95092694 101 - 0.000 0.100 11.872
ENSG00000100697 E025 2.4661572 0.0064693361 2.454416e-01 5.359551e-01 14 95092695 95093887 1193 - 0.454 0.615 0.761
ENSG00000100697 E026 9.8045628 0.0015643126 5.761955e-01 8.104837e-01 14 95093888 95094156 269 - 1.009 1.057 0.176
ENSG00000100697 E027 0.0000000       14 95095346 95095366 21 -      
ENSG00000100697 E028 0.1176306 0.0117478018 6.092566e-01   14 95095367 95095824 458 - 0.090 0.000 -12.505
ENSG00000100697 E029 28.4074485 0.0005323962 3.342345e-01 6.261102e-01 14 95095825 95096713 889 - 1.494 1.440 -0.185
ENSG00000100697 E030 4.9820968 0.1251668924 4.729927e-01 7.401572e-01 14 95099780 95099906 127 - 0.814 0.734 -0.321
ENSG00000100697 E031 2.9176487 0.0053685228 6.118144e-01 8.310655e-01 14 95099907 95099935 29 - 0.626 0.557 -0.309
ENSG00000100697 E032 0.0000000       14 95101905 95103345 1441 -      
ENSG00000100697 E033 19.0362182 0.0008519677 1.144800e-02 8.795753e-02 14 95103346 95104049 704 - 1.376 1.207 -0.595
ENSG00000100697 E034 3.1561609 0.0051979165 3.932907e-01 6.781993e-01 14 95104050 95104126 77 - 0.671 0.557 -0.502
ENSG00000100697 E035 4.8802952 0.0030950387 8.156228e-01 9.325602e-01 14 95105071 95105246 176 - 0.783 0.755 -0.113
ENSG00000100697 E036 0.0000000       14 95105247 95105502 256 -      
ENSG00000100697 E037 3.6561704 0.0038936877 6.997235e-01 8.776083e-01 14 95105678 95105783 106 - 0.691 0.642 -0.211
ENSG00000100697 E038 2.5292828 0.0119349348 9.441800e-02 3.197733e-01 14 95106041 95106079 39 - 0.649 0.408 -1.146
ENSG00000100697 E039 6.2344873 0.0804601668 4.759167e-03 4.782578e-02 14 95106080 95106223 144 - 1.019 0.587 -1.722
ENSG00000100697 E040 6.0432046 0.0024159090 3.381391e-02 1.750217e-01 14 95107608 95107761 154 - 0.946 0.713 -0.911
ENSG00000100697 E041 0.0000000       14 95107762 95107773 12 -      
ENSG00000100697 E042 5.4425151 0.0028280438 6.805941e-02 2.632205e-01 14 95107880 95108072 193 - 0.898 0.690 -0.824
ENSG00000100697 E043 1.9431013 0.0074786869 4.561881e-01 7.286418e-01 14 95108073 95108093 21 - 0.519 0.408 -0.561
ENSG00000100697 E044 3.8960182 0.0201921256 5.158209e-01 7.717138e-01 14 95108324 95108503 180 - 0.730 0.642 -0.371
ENSG00000100697 E045 0.2543986 0.0160291292 2.023690e-01   14 95108689 95111306 2618 - 0.000 0.182 12.802
ENSG00000100697 E046 0.0000000       14 95111307 95111316 10 -      
ENSG00000100697 E047 4.3368996 0.0151300812 2.652240e-02 1.508841e-01 14 95111317 95111456 140 - 0.844 0.557 -1.202
ENSG00000100697 E048 2.5244270 0.0166111741 3.611609e-02 1.824717e-01 14 95112172 95112247 76 - 0.671 0.362 -1.502
ENSG00000100697 E049 3.6578337 0.0953812535 7.453392e-01 8.992489e-01 14 95113092 95113224 133 - 0.692 0.642 -0.212
ENSG00000100697 E050 4.0231045 0.0124182700 6.243990e-01 8.384102e-01 14 95115667 95115821 155 - 0.730 0.667 -0.265
ENSG00000100697 E051 2.5817114 0.0433528943 6.205099e-01 8.359122e-01 14 95116453 95116580 128 - 0.519 0.587 0.313
ENSG00000100697 E052 2.4355343 0.0078442448 5.443162e-01 7.907863e-01 14 95116581 95116687 107 - 0.576 0.489 -0.409
ENSG00000100697 E053 0.9717134 0.0180500782 5.987223e-01 8.240431e-01 14 95116688 95116695 8 - 0.333 0.251 -0.561
ENSG00000100697 E054 2.7957958 0.0053570655 4.605123e-01 7.319245e-01 14 95117622 95117754 133 - 0.626 0.524 -0.461
ENSG00000100697 E055 1.1244334 0.0110974604 6.023357e-02 2.463328e-01 14 95117755 95119393 1639 - 0.165 0.450 1.984
ENSG00000100697 E056 7.1563976 0.0363411756 2.387446e-01 5.277120e-01 14 95124196 95124668 473 - 0.979 0.828 -0.574
ENSG00000100697 E057 2.5404887 0.0062457233 2.131569e-01 4.983917e-01 14 95126580 95126748 169 - 0.626 0.450 -0.824
ENSG00000100697 E058 0.0000000       14 95129061 95129471 411 -      
ENSG00000100697 E059 2.8083661 0.1120991557 9.394736e-01 9.827683e-01 14 95129472 95129632 161 - 0.575 0.587 0.052
ENSG00000100697 E060 3.8644438 0.0230363858 9.703519e-02 3.244975e-01 14 95130058 95130192 135 - 0.783 0.557 -0.961
ENSG00000100697 E061 0.0000000       14 95130193 95130233 41 -      
ENSG00000100697 E062 0.0000000       14 95131245 95131508 264 -      
ENSG00000100697 E063 3.0399439 0.0049791892 4.935631e-01 7.554082e-01 14 95131509 95131639 131 - 0.649 0.557 -0.409
ENSG00000100697 E064 0.7515536 0.3521582888 1.928833e-01 4.727265e-01 14 95131640 95132052 413 - 0.090 0.362 2.498
ENSG00000100697 E065 0.9969189 0.0124735400 1.088194e-01 3.462983e-01 14 95132053 95132514 462 - 0.165 0.408 1.761
ENSG00000100697 E066 2.8948533 0.0240681538 9.850459e-02 3.274954e-01 14 95132515 95132677 163 - 0.691 0.450 -1.104
ENSG00000100697 E067 1.9416836 0.1611466283 4.671201e-01 7.356455e-01 14 95133315 95133503 189 - 0.519 0.408 -0.560
ENSG00000100697 E068 0.1272623 0.0123820406 4.744189e-01   14 95134361 95134503 143 - 0.000 0.100 11.871
ENSG00000100697 E069 0.0000000       14 95136623 95136810 188 -      
ENSG00000100697 E070 0.9713313 0.4367518600 6.302219e-01 8.414090e-01 14 95140659 95140754 96 - 0.333 0.251 -0.560
ENSG00000100697 E071 0.2457744 0.0162655649 9.225225e-01   14 95140755 95140759 5 - 0.090 0.100 0.176
ENSG00000100697 E072 0.0000000       14 95141154 95141187 34 -      
ENSG00000100697 E073 0.4994178 0.0216164188 2.648074e-01   14 95141683 95141748 66 - 0.090 0.251 1.761
ENSG00000100697 E074 0.1268540 0.0123511016 4.744233e-01   14 95156187 95156403 217 - 0.000 0.100 11.871
ENSG00000100697 E075 1.0999191 0.0245230935 8.898694e-01 9.632796e-01 14 95157230 95157390 161 - 0.333 0.310 -0.146
ENSG00000100697 E076 0.2536433 0.0159502602 2.025654e-01   14 95157391 95157529 139 - 0.000 0.182 12.802
ENSG00000100697 E077 0.0000000       14 95157931 95158010 80 -      

Help

Please Click HERE to learn more details about the results from DEXseq.