ENSG00000100813

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

  • Note:

    • About the Coding Potential: Please check the spreadsheet in the “Results” tag to confirm the coding potential. The above figure only show the predicted coding potential. The “gene_biotype” in the result spreadsheet is from the database record. Therefore, if you find conflicts between “gene_biotype” and “codingPotential”, please trust the “gene_biotype”.

    • Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

    • For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000338631 ENSG00000100813 No_inf pgKDN_inf ACIN1 protein_coding protein_coding 80.27891 96.16799 65.12442 1.51264 0.9769114 -0.5622868 16.568688 9.883896 17.448329 0.3718398 1.1866389 0.8193049 0.21735000 0.102750 0.268900 0.166150 0.0006891663 0.0006891663 FALSE TRUE
ENST00000357481 ENSG00000100813 No_inf pgKDN_inf ACIN1 protein_coding protein_coding 80.27891 96.16799 65.12442 1.51264 0.9769114 -0.5622868 3.268143 1.921789 5.037212 1.9217890 3.1513889 1.3855490 0.04442500 0.020775 0.075600 0.054825 0.7392819832 0.0006891663 FALSE TRUE
ENST00000397341 ENSG00000100813 No_inf pgKDN_inf ACIN1 protein_coding protein_coding 80.27891 96.16799 65.12442 1.51264 0.9769114 -0.5622868 5.410887 3.469944 4.599883 2.0087136 1.8707373 0.4056661 0.06939167 0.035750 0.070300 0.034550 0.7994963100 0.0006891663 FALSE TRUE
ENST00000473758 ENSG00000100813 No_inf pgKDN_inf ACIN1 protein_coding nonsense_mediated_decay 80.27891 96.16799 65.12442 1.51264 0.9769114 -0.5622868 7.034743 11.011920 3.364062 1.3791075 1.2874054 -1.7078172 0.08389167 0.115175 0.051875 -0.063300 0.5135624848 0.0006891663 FALSE TRUE
ENST00000554680 ENSG00000100813 No_inf pgKDN_inf ACIN1 protein_coding retained_intron 80.27891 96.16799 65.12442 1.51264 0.9769114 -0.5622868 2.660337 6.961556 0.000000 4.0208572 0.0000000 -9.4453369 0.02840000 0.072075 0.000000 -0.072075 0.5515685621 0.0006891663   FALSE
MSTRG.8285.2 ENSG00000100813 No_inf pgKDN_inf ACIN1 protein_coding   80.27891 96.16799 65.12442 1.51264 0.9769114 -0.5622868 9.283023 15.659464 5.706154 0.4092107 0.7195648 -1.4548391 0.11090000 0.162925 0.087725 -0.075200 0.2059794584 0.0006891663 FALSE TRUE
MSTRG.8285.9 ENSG00000100813 No_inf pgKDN_inf ACIN1 protein_coding   80.27891 96.16799 65.12442 1.51264 0.9769114 -0.5622868 10.840578 13.591895 9.940273 2.0239915 1.8218445 -0.4509997 0.13515000 0.140800 0.153125 0.012325 0.9741712982 0.0006891663 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

Help

Please Click HERE to learn more details about the results of IsoformSwitchAnalyzeR.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand pgKDN.inf No.inf log2fold_No.inf_pgKDN.inf
ENSG00000100813 E001 0.0000000       14 23058564 23058566 3 -      
ENSG00000100813 E002 0.0000000       14 23058567 23058574 8 -      
ENSG00000100813 E003 0.0000000       14 23058575 23058579 5 -      
ENSG00000100813 E004 0.0000000       14 23058580 23058588 9 -      
ENSG00000100813 E005 151.1302961 0.0001573981 2.277092e-04 4.655522e-03 14 23058589 23059058 470 - 2.223 2.129 -0.313
ENSG00000100813 E006 167.1450676 0.0064253596 1.985147e-01 4.799271e-01 14 23059059 23059474 416 - 2.242 2.188 -0.181
ENSG00000100813 E007 67.6638551 0.0002564343 1.183105e-01 3.633595e-01 14 23061084 23061184 101 - 1.858 1.797 -0.206
ENSG00000100813 E008 91.2547592 0.0002308236 7.348925e-01 8.948191e-01 14 23061298 23061501 204 - 1.957 1.943 -0.047
ENSG00000100813 E009 29.5879082 0.0032208663 3.840299e-01 6.701265e-01 14 23061502 23061571 70 - 1.436 1.487 0.174
ENSG00000100813 E010 30.0931949 0.0176300940 3.817631e-01 6.681381e-01 14 23061572 23061622 51 - 1.431 1.500 0.237
ENSG00000100813 E011 67.9132472 0.0077117331 3.143629e-01 6.074177e-01 14 23062168 23062275 108 - 1.856 1.801 -0.186
ENSG00000100813 E012 36.0453350 0.0031370770 8.461430e-01 9.453847e-01 14 23062416 23062432 17 - 1.561 1.547 -0.046
ENSG00000100813 E013 67.5042301 0.0010767375 5.258658e-01 7.784485e-01 14 23062433 23062523 91 - 1.836 1.808 -0.094
ENSG00000100813 E014 0.8709125 0.0502079735 6.126296e-01 8.315481e-01 14 23062524 23062770 247 - 0.211 0.292 0.612
ENSG00000100813 E015 80.0067247 0.0012922387 1.389465e-01 3.963789e-01 14 23062929 23063037 109 - 1.927 1.870 -0.193
ENSG00000100813 E016 31.2543261 0.0027828016 8.519656e-01 9.476788e-01 14 23063038 23063039 2 - 1.501 1.487 -0.049
ENSG00000100813 E017 42.2108547 0.0012981240 5.429280e-01 7.900418e-01 14 23063040 23063074 35 - 1.639 1.607 -0.111
ENSG00000100813 E018 3.8795208 0.0046783021 2.594130e-02 1.489374e-01 14 23063075 23063431 357 - 0.459 0.762 1.349
ENSG00000100813 E019 0.3810317 0.0362467317 2.403602e-01   14 23063432 23063435 4 - 0.000 0.197 10.254
ENSG00000100813 E020 34.6721766 0.0004232554 5.456613e-01 7.915364e-01 14 23063436 23063453 18 - 1.557 1.523 -0.117
ENSG00000100813 E021 35.5067857 0.0023324686 5.441971e-01 7.907588e-01 14 23063454 23063459 6 - 1.526 1.557 0.105
ENSG00000100813 E022 36.1933436 0.0006057359 9.630718e-01 9.921323e-01 14 23063460 23063464 5 - 1.557 1.552 -0.018
ENSG00000100813 E023 91.4723194 0.0002192468 5.573404e-01 7.993666e-01 14 23063465 23063577 113 - 1.963 1.941 -0.073
ENSG00000100813 E024 79.4696908 0.0001966769 4.807780e-01 7.460464e-01 14 23064105 23064221 117 - 1.906 1.879 -0.091
ENSG00000100813 E025 29.9991441 0.0007474253 7.520727e-01 9.024157e-01 14 23064222 23064257 36 - 1.488 1.467 -0.071
ENSG00000100813 E026 2.4940735 0.0056946441 2.196686e-01 5.062430e-01 14 23064258 23064354 97 - 0.409 0.588 0.875
ENSG00000100813 E027 68.9770513 0.0034715139 1.529488e-01 4.172700e-01 14 23064355 23064485 131 - 1.788 1.849 0.205
ENSG00000100813 E028 21.8172552 0.0006123207 1.592892e-01 4.266196e-01 14 23064486 23064488 3 - 1.282 1.373 0.315
ENSG00000100813 E029 7.4027473 0.0018756590 4.402874e-04 7.903229e-03 14 23064489 23064710 222 - 0.616 1.016 1.583
ENSG00000100813 E030 39.7749442 0.0004410196 1.000026e-01 3.304866e-01 14 23065966 23066008 43 - 1.542 1.621 0.270
ENSG00000100813 E031 166.6685713 0.0003458759 9.446938e-13 1.248802e-10 14 23066009 23067313 1305 - 2.085 2.264 0.601
ENSG00000100813 E032 157.9215793 0.0005775967 3.155616e-07 1.645986e-05 14 23067314 23068362 1049 - 2.095 2.228 0.446
ENSG00000100813 E033 16.5502972 0.0008210415 2.212913e-02 1.351656e-01 14 23068363 23068390 28 - 1.110 1.283 0.612
ENSG00000100813 E034 28.0453942 0.0004849039 5.216382e-02 2.267793e-01 14 23068391 23068464 74 - 1.372 1.484 0.387
ENSG00000100813 E035 12.8678270 0.0011090733 5.997274e-01 8.245853e-01 14 23068465 23068480 16 - 1.100 1.141 0.147
ENSG00000100813 E036 40.3372897 0.0003620103 1.194424e-02 9.021718e-02 14 23068481 23068671 191 - 1.518 1.640 0.418
ENSG00000100813 E037 14.0148165 0.0012030788 1.720662e-01 4.447958e-01 14 23068672 23068701 30 - 1.089 1.197 0.387
ENSG00000100813 E038 35.8421598 0.0003808181 4.981828e-02 2.202015e-01 14 23068702 23069032 331 - 1.483 1.583 0.343
ENSG00000100813 E039 37.6973571 0.0004172830 7.926462e-02 2.887382e-01 14 23069033 23069328 296 - 1.513 1.600 0.297
ENSG00000100813 E040 16.4281628 0.0008326985 1.588364e-02 1.092549e-01 14 23069329 23069475 147 - 1.100 1.283 0.650
ENSG00000100813 E041 48.7462353 0.0002930193 2.480216e-06 1.021910e-04 14 23069476 23069617 142 - 1.799 1.594 -0.696
ENSG00000100813 E042 6.7571623 0.0040308874 2.783890e-01 5.716875e-01 14 23071125 23071186 62 - 0.946 0.829 -0.447
ENSG00000100813 E043 7.7331644 0.0021123948 1.294834e-01 3.817194e-01 14 23071187 23071426 240 - 1.017 0.864 -0.573
ENSG00000100813 E044 3.6659659 0.1036201847 1.987286e-01 4.801643e-01 14 23071427 23071433 7 - 0.779 0.566 -0.904
ENSG00000100813 E045 9.7186835 0.0016754062 3.725631e-05 1.037368e-03 14 23071434 23071617 184 - 1.213 0.841 -1.371
ENSG00000100813 E046 1.0166216 0.0161627576 1.387360e-02 9.939253e-02 14 23076470 23076548 79 - 0.000 0.403 11.823
ENSG00000100813 E047 1.2493960 0.0537931370 2.446785e-01 5.350291e-01 14 23077797 23078150 354 - 0.211 0.403 1.290
ENSG00000100813 E048 26.9624217 0.0016320726 2.513506e-01 5.425781e-01 14 23078151 23078266 116 - 1.474 1.403 -0.245
ENSG00000100813 E049 22.2509891 0.0006216062 7.001793e-02 2.677348e-01 14 23078820 23078933 114 - 1.421 1.304 -0.406
ENSG00000100813 E050 19.8493600 0.0019473880 4.671616e-01 7.356680e-01 14 23078934 23079038 105 - 1.336 1.283 -0.185
ENSG00000100813 E051 147.1606737 0.0015249858 4.633255e-05 1.253210e-03 14 23079547 23080809 1263 - 2.227 2.106 -0.403
ENSG00000100813 E052 10.0163358 0.0018549979 8.469289e-01 9.456845e-01 14 23081748 23081836 89 - 1.017 1.032 0.055
ENSG00000100813 E053 3.9649521 0.0036529863 6.668862e-01 8.614433e-01 14 23089982 23090101 120 - 0.648 0.701 0.223
ENSG00000100813 E054 12.9602764 0.0225987226 9.635837e-03 7.844750e-02 14 23090522 23090633 112 - 1.275 1.016 -0.929
ENSG00000100813 E055 9.8964851 0.0016617274 3.561451e-03 3.920867e-02 14 23093479 23093544 66 - 1.170 0.907 -0.960
ENSG00000100813 E056 12.6134350 0.0010574330 8.625725e-01 9.525857e-01 14 23094975 23095614 640 - 1.110 1.122 0.042

Help

Please Click HERE to learn more details about the results from DEXseq.