ENSG00000101160

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

  • Note:

    • About the Coding Potential: Please check the spreadsheet in the “Results” tag to confirm the coding potential. The above figure only show the predicted coding potential. The “gene_biotype” in the result spreadsheet is from the database record. Therefore, if you find conflicts between “gene_biotype” and “codingPotential”, please trust the “gene_biotype”.

    • Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

    • For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000217131 ENSG00000101160 No_inf pgKDN_inf CTSZ protein_coding protein_coding 409.928 300.5045 479.8882 6.101866 6.984359 0.6752937 99.76127 56.8439 125.6654 2.284144 4.742997 1.1443712 0.2370917 0.189375 0.2620 0.072625 0.04660754 0.02514223 FALSE  
ENST00000681366 ENSG00000101160 No_inf pgKDN_inf CTSZ protein_coding protein_coding_CDS_not_defined 409.928 300.5045 479.8882 6.101866 6.984359 0.6752937 279.67299 209.0222 328.6755 5.644272 7.713201 0.6529824 0.6835167 0.695300 0.6847 -0.010600 0.86885827 0.02514223 FALSE  
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

Help

Please Click HERE to learn more details about the results of IsoformSwitchAnalyzeR.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand pgKDN.inf No.inf log2fold_No.inf_pgKDN.inf
ENSG00000101160 E001 3.2283863 4.440747e-03 4.592352e-03 4.666436e-02 20 58985686 58990610 4925 - 0.422 0.796 1.675
ENSG00000101160 E002 0.0000000       20 58990611 58991436 826 -      
ENSG00000101160 E003 0.0000000       20 58991437 58992108 672 -      
ENSG00000101160 E004 0.0000000       20 58992109 58992116 8 -      
ENSG00000101160 E005 0.0000000       20 58992117 58992118 2 -      
ENSG00000101160 E006 0.0000000       20 58992119 58992121 3 -      
ENSG00000101160 E007 0.6099046 3.432524e-01 9.146909e-01 9.730939e-01 20 58992122 58992238 117 - 0.209 0.200 -0.082
ENSG00000101160 E008 7.2414470 1.903715e-03 8.620495e-02 3.041990e-01 20 58992239 58992761 523 - 0.830 1.002 0.651
ENSG00000101160 E009 1.3418534 9.440751e-03 7.832955e-01 9.165837e-01 20 58992762 58992821 60 - 0.349 0.391 0.242
ENSG00000101160 E010 0.4896324 1.585627e-02 7.274473e-01   20 58992822 58992841 20 - 0.150 0.200 0.505
ENSG00000101160 E011 0.4893501 8.453756e-02 7.411322e-01   20 58992842 58992910 69 - 0.150 0.200 0.505
ENSG00000101160 E012 0.3709943 1.669358e-02 3.887285e-01   20 58992911 58993947 1037 - 0.081 0.200 1.505
ENSG00000101160 E013 0.0000000       20 58993948 58994221 274 -      
ENSG00000101160 E014 4.7817328 9.289057e-03 2.284870e-01 5.171739e-01 20 58994222 58995184 963 - 0.691 0.834 0.579
ENSG00000101160 E015 0.4906064 1.286357e-01 7.491136e-01   20 58995185 58995186 2 - 0.150 0.200 0.505
ENSG00000101160 E016 0.4906064 1.286357e-01 7.491136e-01   20 58995187 58995188 2 - 0.150 0.200 0.505
ENSG00000101160 E017 0.4906064 1.286357e-01 7.491136e-01   20 58995189 58995190 2 - 0.150 0.200 0.505
ENSG00000101160 E018 0.4906064 1.286357e-01 7.491136e-01   20 58995191 58995191 1 - 0.150 0.200 0.505
ENSG00000101160 E019 0.4906064 1.286357e-01 7.491136e-01   20 58995192 58995199 8 - 0.150 0.200 0.505
ENSG00000101160 E020 0.4906064 1.286357e-01 7.491136e-01   20 58995200 58995205 6 - 0.150 0.200 0.505
ENSG00000101160 E021 0.4906064 1.286357e-01 7.491136e-01   20 58995206 58995225 20 - 0.150 0.200 0.505
ENSG00000101160 E022 7.0656641 1.961470e-03 7.836869e-01 9.167836e-01 20 58995226 58995257 32 - 0.891 0.918 0.104
ENSG00000101160 E023 11.5746489 1.163822e-03 7.181915e-01 8.865872e-01 20 58995258 58995260 3 - 1.083 1.112 0.107
ENSG00000101160 E024 1163.8796245 3.263663e-05 1.063295e-01 3.413963e-01 20 58995261 58995749 489 - 3.057 3.069 0.038
ENSG00000101160 E025 152.1848841 1.268054e-04 8.280608e-01 9.377386e-01 20 58995750 58995759 10 - 2.184 2.178 -0.020
ENSG00000101160 E026 5.8249832 5.291907e-02 6.915217e-03 6.259908e-02 20 58995760 58995932 173 - 0.632 1.002 1.459
ENSG00000101160 E027 6.4774409 2.465358e-03 4.782736e-06 1.814009e-04 20 58995933 58996062 130 - 0.588 1.082 1.945
ENSG00000101160 E028 19.0999620 2.972780e-03 4.628902e-10 4.216482e-08 20 58996063 58996578 516 - 1.052 1.496 1.561
ENSG00000101160 E029 1.4610208 6.170572e-02 9.831358e-01 9.986903e-01 20 58996579 58996579 1 - 0.387 0.390 0.019
ENSG00000101160 E030 1.4610208 6.170572e-02 9.831358e-01 9.986903e-01 20 58996580 58996582 3 - 0.387 0.390 0.019
ENSG00000101160 E031 1.9494247 2.553811e-02 8.528878e-01 9.481141e-01 20 58996583 58996590 8 - 0.455 0.483 0.142
ENSG00000101160 E032 4.4897624 3.126956e-03 6.706082e-01 8.631296e-01 20 58996591 58996638 48 - 0.758 0.706 -0.212
ENSG00000101160 E033 426.7379466 1.487104e-03 4.939027e-01 7.556922e-01 20 58996639 58996801 163 - 2.633 2.619 -0.046
ENSG00000101160 E034 2.8157577 7.321830e-02 5.666720e-01 8.047057e-01 20 58996802 58996851 50 - 0.540 0.624 0.379
ENSG00000101160 E035 4.5748279 3.082608e-03 1.181398e-02 8.970430e-02 20 58996852 58996989 138 - 0.588 0.887 1.221
ENSG00000101160 E036 3.9816355 3.767394e-03 5.609796e-04 9.559518e-03 20 58996990 58997134 145 - 0.455 0.887 1.858
ENSG00000101160 E037 1.3507611 9.866298e-03 3.833092e-01 6.694609e-01 20 58997135 58997152 18 - 0.307 0.439 0.768
ENSG00000101160 E038 9.1551396 2.726035e-02 8.113009e-04 1.274962e-02 20 58997153 58997602 450 - 0.802 1.176 1.390
ENSG00000101160 E039 430.9581362 5.204801e-05 5.064085e-01 7.651421e-01 20 58997603 58997753 151 - 2.636 2.626 -0.033
ENSG00000101160 E040 4.5704856 3.283393e-03 1.192372e-02 9.017285e-02 20 58997754 58997854 101 - 0.588 0.887 1.221
ENSG00000101160 E041 4.5339766 3.235131e-03 2.254581e-01 5.133073e-01 20 58997855 58997954 100 - 0.672 0.816 0.583
ENSG00000101160 E042 9.2641775 1.494213e-03 2.384113e-04 4.832197e-03 20 58997955 58998597 643 - 0.830 1.167 1.252
ENSG00000101160 E043 2.7945810 4.116634e-02 8.412019e-01 9.430543e-01 20 58998598 58998690 93 - 0.589 0.559 -0.133
ENSG00000101160 E044 8.0450023 1.780655e-03 1.891453e-04 3.994797e-03 20 58998691 58999234 544 - 0.758 1.122 1.373
ENSG00000101160 E045 5.5474858 2.499875e-03 1.283814e-02 9.450964e-02 20 58999235 58999580 346 - 0.672 0.948 1.090
ENSG00000101160 E046 0.4815466 3.185653e-02 5.209670e-01   20 58999581 58999616 36 - 0.209 0.111 -1.080
ENSG00000101160 E047 464.6409572 5.585460e-04 8.235668e-03 7.046042e-02 20 59001465 59001644 180 - 2.682 2.639 -0.143
ENSG00000101160 E048 11.3582889 1.895362e-03 9.378743e-05 2.255163e-03 20 59001645 59004838 3194 - 0.913 1.246 1.208
ENSG00000101160 E049 0.7540075 1.456686e-02 3.654542e-02 1.838657e-01 20 59005155 59005311 157 - 0.081 0.391 2.827
ENSG00000101160 E050 1.0997254 1.771105e-02 8.524795e-01 9.478751e-01 20 59006042 59006321 280 - 0.307 0.336 0.183
ENSG00000101160 E051 302.3913020 7.836535e-05 6.959151e-04 1.130186e-02 20 59006322 59006450 129 - 2.503 2.443 -0.198
ENSG00000101160 E052 127.3828584 1.894340e-04 3.514485e-01 6.416514e-01 20 59006451 59006485 35 - 2.115 2.089 -0.087
ENSG00000101160 E053 3.1311452 5.700230e-03 9.821543e-05 2.338698e-03 20 59006486 59006638 153 - 0.307 0.834 2.505
ENSG00000101160 E054 1.2590949 1.041755e-02 1.407064e-03 1.947479e-02 20 59006639 59006825 187 - 0.081 0.559 3.675
ENSG00000101160 E055 1.1145871 1.087495e-02 1.296873e-01 3.820188e-01 20 59006826 59006985 160 - 0.209 0.439 1.505
ENSG00000101160 E056 246.4090670 8.640190e-05 2.108948e-02 1.312683e-01 20 59006986 59007846 861 - 2.408 2.363 -0.151
ENSG00000101160 E057 0.0000000       20 59008122 59008238 117 -      

Help

Please Click HERE to learn more details about the results from DEXseq.