ENSG00000102595

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

  • Note:

    • About the Coding Potential: Please check the spreadsheet in the “Results” tag to confirm the coding potential. The above figure only show the predicted coding potential. The “gene_biotype” in the result spreadsheet is from the database record. Therefore, if you find conflicts between “gene_biotype” and “codingPotential”, please trust the “gene_biotype”.

    • Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

    • For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000376747 ENSG00000102595 No_inf pgKDN_inf UGGT2 protein_coding protein_coding 15.35851 13.4611 14.95 1.988318 1.026025 0.1512423 3.0142221 1.6608348 3.4527352 0.2386789 0.3860560 1.0513430 0.20158333 0.135475 0.238575 0.103100 6.282849e-01 5.274192e-05 FALSE TRUE
ENST00000461329 ENSG00000102595 No_inf pgKDN_inf UGGT2 protein_coding protein_coding_CDS_not_defined 15.35851 13.4611 14.95 1.988318 1.026025 0.1512423 1.5229247 0.0000000 2.6125527 0.0000000 0.3526855 8.0348280 0.09913333 0.000000 0.180250 0.180250 5.274192e-05 5.274192e-05 FALSE TRUE
ENST00000462472 ENSG00000102595 No_inf pgKDN_inf UGGT2 protein_coding protein_coding_CDS_not_defined 15.35851 13.4611 14.95 1.988318 1.026025 0.1512423 0.9873799 1.0903788 0.6074414 0.5509877 0.3643481 -0.8336262 0.07296667 0.090350 0.038950 -0.051400 8.259587e-01 5.274192e-05 FALSE FALSE
ENST00000467305 ENSG00000102595 No_inf pgKDN_inf UGGT2 protein_coding protein_coding_CDS_not_defined 15.35851 13.4611 14.95 1.988318 1.026025 0.1512423 0.2721163 0.8163488 0.0000000 0.3590550 0.0000000 -6.3686790 0.01821667 0.054650 0.000000 -0.054650 9.958620e-02 5.274192e-05 FALSE TRUE
MSTRG.8030.10 ENSG00000102595 No_inf pgKDN_inf UGGT2 protein_coding   15.35851 13.4611 14.95 1.988318 1.026025 0.1512423 0.2935149 0.8805448 0.0000000 0.5118161 0.0000000 -6.4766164 0.02097500 0.062925 0.000000 -0.062925 4.575154e-01 5.274192e-05 FALSE TRUE
MSTRG.8030.11 ENSG00000102595 No_inf pgKDN_inf UGGT2 protein_coding   15.35851 13.4611 14.95 1.988318 1.026025 0.1512423 2.4244840 2.7298473 0.0000000 2.7298473 0.0000000 -8.0979517 0.12362500 0.154000 0.000000 -0.154000 8.408233e-01 5.274192e-05   FALSE
MSTRG.8030.2 ENSG00000102595 No_inf pgKDN_inf UGGT2 protein_coding   15.35851 13.4611 14.95 1.988318 1.026025 0.1512423 3.8716200 2.9427225 4.7095027 0.6975375 0.5123052 0.6765891 0.26141667 0.241950 0.316600 0.074650 8.305844e-01 5.274192e-05 FALSE TRUE
MSTRG.8030.3 ENSG00000102595 No_inf pgKDN_inf UGGT2 protein_coding   15.35851 13.4611 14.95 1.988318 1.026025 0.1512423 0.8847666 1.1176536 1.2119160 0.3491695 0.6457311 0.1158211 0.05783333 0.077825 0.073700 -0.004125 9.184626e-01 5.274192e-05 FALSE TRUE
MSTRG.8030.5 ENSG00000102595 No_inf pgKDN_inf UGGT2 protein_coding   15.35851 13.4611 14.95 1.988318 1.026025 0.1512423 0.1515140 0.4545419 0.0000000 0.4545419 0.0000000 -5.5377368 0.01852500 0.055575 0.000000 -0.055575 8.546561e-01 5.274192e-05 FALSE TRUE
MSTRG.8030.9 ENSG00000102595 No_inf pgKDN_inf UGGT2 protein_coding   15.35851 13.4611 14.95 1.988318 1.026025 0.1512423 1.0171458 0.4636482 2.0758164 0.4636482 0.7502990 2.1387245 0.06678333 0.031725 0.133975 0.102250 4.374677e-01 5.274192e-05 TRUE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

Help

Please Click HERE to learn more details about the results of IsoformSwitchAnalyzeR.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand pgKDN.inf No.inf log2fold_No.inf_pgKDN.inf
ENSG00000102595 E001 0.3617683 0.212247448 0.86165685   13 95801580 95801624 45 - 0.148 0.113 -0.451
ENSG00000102595 E002 9.2175502 0.001643147 0.44315752 0.71823816 13 95801625 95801812 188 - 1.030 0.968 -0.229
ENSG00000102595 E003 1.3519898 0.013486439 0.37561957 0.66308123 13 95816062 95816104 43 - 0.304 0.443 0.811
ENSG00000102595 E004 12.0610819 0.002470450 0.63829622 0.84587166 13 95832927 95833053 127 - 1.091 1.138 0.167
ENSG00000102595 E005 11.1080902 0.001420705 0.32195840 0.61495571 13 95837086 95837202 117 - 1.038 1.128 0.326
ENSG00000102595 E006 8.4470739 0.044372831 0.27800266 0.57123574 13 95853543 95853657 115 - 0.908 1.044 0.506
ENSG00000102595 E007 8.0076294 0.002199939 0.42946768 0.70768771 13 95854315 95854451 137 - 0.978 0.909 -0.259
ENSG00000102595 E008 3.2934612 0.004877579 0.72760694 0.89131354 13 95854452 95854475 24 - 0.606 0.658 0.226
ENSG00000102595 E009 8.8809078 0.003945332 0.81547394 0.93251545 13 95856158 95856340 183 - 0.978 1.008 0.110
ENSG00000102595 E010 0.2542726 0.250952437 0.18564932   13 95859397 95859590 194 - 0.000 0.202 13.655
ENSG00000102595 E011 6.1261397 0.002575093 0.12046526 0.36715108 13 95859591 95859675 85 - 0.768 0.939 0.664
ENSG00000102595 E012 1.1221675 0.015440909 0.02746209 0.15438193 13 95859676 95859895 220 - 0.148 0.487 2.356
ENSG00000102595 E013 5.1365573 0.005612369 0.25301262 0.54440207 13 95860788 95860883 96 - 0.720 0.858 0.548
ENSG00000102595 E014 0.2533610 0.016030311 0.14167526   13 95863434 95863628 195 - 0.000 0.202 13.655
ENSG00000102595 E015 4.7698490 0.003093146 0.33728451 0.62907987 13 95863629 95863714 86 - 0.703 0.821 0.474
ENSG00000102595 E016 4.2621779 0.003484108 0.83429917 0.94035591 13 95867339 95867423 85 - 0.703 0.736 0.133
ENSG00000102595 E017 0.0000000       13 95876902 95877278 377 -      
ENSG00000102595 E018 3.4047296 0.005433617 0.84691920 0.94568449 13 95877279 95877364 86 - 0.647 0.629 -0.080
ENSG00000102595 E019 0.1170040 0.011760444 0.77514616   13 95877365 95877697 333 - 0.080 0.000 -11.663
ENSG00000102595 E020 5.2733518 0.003464533 0.18408606 0.46118997 13 95877698 95877856 159 - 0.720 0.876 0.615
ENSG00000102595 E021 3.9916028 0.003667072 0.36065752 0.65031937 13 95884491 95884612 122 - 0.737 0.629 -0.452
ENSG00000102595 E022 2.1019078 0.110178524 0.09474367 0.32022438 13 95884613 95884680 68 - 0.345 0.629 1.424
ENSG00000102595 E023 0.1187032 0.011850420 0.77524187   13 95885405 95885460 56 - 0.080 0.000 -11.663
ENSG00000102595 E024 0.1186381 0.011854550 0.77523095   13 95886930 95886974 45 - 0.080 0.000 -11.663
ENSG00000102595 E025 1.2358682 0.011140182 0.23358142 0.52245595 13 95887273 95887393 121 - 0.258 0.443 1.133
ENSG00000102595 E026 3.0564017 0.004709697 0.48812678 0.75154524 13 95887892 95887971 80 - 0.560 0.658 0.433
ENSG00000102595 E027 3.5499232 0.082974544 0.51567756 0.77161325 13 95890862 95890964 103 - 0.606 0.711 0.448
ENSG00000102595 E028 1.2242179 0.122940149 0.62622617 0.83937776 13 95894562 95894575 14 - 0.304 0.394 0.548
ENSG00000102595 E029 3.2566048 0.004474450 0.21893475 0.50569708 13 95894576 95894657 82 - 0.685 0.527 -0.700
ENSG00000102595 E030 5.5405808 0.002685982 0.06995794 0.26761554 13 95895180 95895304 125 - 0.885 0.686 -0.796
ENSG00000102595 E031 5.1795718 0.002950738 0.07223514 0.27267149 13 95900807 95900938 132 - 0.862 0.658 -0.821
ENSG00000102595 E032 3.2561340 0.004248406 0.21888394 0.50563304 13 95902854 95903060 207 - 0.685 0.527 -0.700
ENSG00000102595 E033 2.6854332 0.005625442 0.68084409 0.86816715 13 95925680 95925774 95 - 0.535 0.598 0.285
ENSG00000102595 E034 2.4324196 0.005946738 0.92187290 0.97574057 13 95927028 95927126 99 - 0.535 0.527 -0.037
ENSG00000102595 E035 3.7428044 0.004631397 0.16622666 0.43641342 13 95927213 95927336 124 - 0.737 0.564 -0.741
ENSG00000102595 E036 2.7827724 0.006577906 0.29691327 0.59017175 13 95936924 95937088 165 - 0.627 0.487 -0.644
ENSG00000102595 E037 1.5997729 0.061114493 0.39958444 0.68338134 13 95939957 95940009 53 - 0.345 0.487 0.770
ENSG00000102595 E038 1.9820976 0.073535112 0.11811745 0.36309167 13 95940010 95940091 82 - 0.345 0.598 1.285
ENSG00000102595 E039 0.3802150 0.025856384 0.05133753   13 95943667 95943723 57 - 0.000 0.276 14.239
ENSG00000102595 E040 2.3269617 0.304437492 0.51480157 0.77118226 13 95947037 95947172 136 - 0.481 0.564 0.393
ENSG00000102595 E041 1.6941198 0.010149204 0.68095401 0.86816715 13 95947996 95948081 86 - 0.450 0.394 -0.300
ENSG00000102595 E042 2.3036840 0.005959882 0.70671124 0.88102231 13 95949335 95949454 120 - 0.535 0.487 -0.229
ENSG00000102595 E043 1.9449021 0.007972308 0.77309686 0.91266923 13 95970112 95970220 109 - 0.481 0.443 -0.189
ENSG00000102595 E044 0.8453272 0.015641889 0.49457715 0.75596051 13 95970221 95970262 42 - 0.304 0.202 -0.774
ENSG00000102595 E045 1.3272510 0.011070386 0.34518271 0.63621284 13 95972580 95972613 34 - 0.418 0.276 -0.867
ENSG00000102595 E046 1.8165025 0.048444504 0.57020060 0.80689526 13 95972614 95972671 58 - 0.481 0.394 -0.452
ENSG00000102595 E047 0.0000000       13 95983523 95983523 1 -      
ENSG00000102595 E048 0.0000000       13 95983524 95983595 72 -      
ENSG00000102595 E049 1.9332866 0.105864372 0.53369067 0.78410746 13 95983804 95983864 61 - 0.509 0.394 -0.589
ENSG00000102595 E050 0.0000000       13 95984904 95984909 6 -      
ENSG00000102595 E051 0.0000000       13 95984910 95985046 137 -      
ENSG00000102595 E052 2.7698995 0.005394087 0.13535699 0.39101290 13 95985047 95985337 291 - 0.647 0.443 -0.954
ENSG00000102595 E053 4.3381403 0.026717270 0.12468283 0.37436825 13 95986333 95986432 100 - 0.797 0.598 -0.830
ENSG00000102595 E054 0.1265070 0.012260482 0.37143189   13 95989521 95989598 78 - 0.000 0.113 12.655
ENSG00000102595 E055 3.1293049 0.006669039 0.13534149 0.39101290 13 95989973 95990073 101 - 0.685 0.487 -0.892
ENSG00000102595 E056 1.2611378 0.010084644 0.00129368 0.01826049 13 95990145 95991473 1329 - 0.080 0.564 3.718
ENSG00000102595 E057 0.0000000       13 95995911 95995914 4 -      
ENSG00000102595 E058 3.1426702 0.090759254 0.40832658 0.69068009 13 95996063 95996135 73 - 0.667 0.527 -0.622
ENSG00000102595 E059 3.1585703 0.005050499 0.78528143 0.91725579 13 95999211 95999307 97 - 0.627 0.598 -0.130
ENSG00000102595 E060 1.9606968 0.007096152 0.47645119 0.74296465 13 96013307 96013480 174 - 0.418 0.527 0.548
ENSG00000102595 E061 0.4899121 0.015763569 0.72183890   13 96013481 96013481 1 - 0.148 0.202 0.548
ENSG00000102595 E062 1.8283638 0.031936238 0.94094846 0.98331941 13 96023040 96023152 113 - 0.451 0.443 -0.037
ENSG00000102595 E063 3.6136218 0.004113401 0.10066797 0.33121302 13 96023629 96023759 131 - 0.737 0.527 -0.911
ENSG00000102595 E064 2.1856730 0.006997616 0.84858815 0.94637732 13 96031889 96031971 83 - 0.509 0.487 -0.104
ENSG00000102595 E065 2.0432344 0.006964661 0.13020145 0.38283188 13 96053155 96053482 328 - 0.560 0.339 -1.152

Help

Please Click HERE to learn more details about the results from DEXseq.