ENSG00000107099

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

  • Note:

    • About the Coding Potential: Please check the spreadsheet in the “Results” tag to confirm the coding potential. The above figure only show the predicted coding potential. The “gene_biotype” in the result spreadsheet is from the database record. Therefore, if you find conflicts between “gene_biotype” and “codingPotential”, please trust the “gene_biotype”.

    • Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

    • For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000432829 ENSG00000107099 No_inf pgKDN_inf DOCK8 protein_coding protein_coding 124.1568 150.9487 117.9929 0.8373856 1.285755 -0.3553319 7.524117 2.025039 9.421272 1.2275050 0.9961715 2.2123959 0.06685833 0.013475 0.079700 0.066225 0.1090227883 0.0005610685 FALSE TRUE
ENST00000453981 ENSG00000107099 No_inf pgKDN_inf DOCK8 protein_coding protein_coding 124.1568 150.9487 117.9929 0.8373856 1.285755 -0.3553319 22.127140 17.620855 26.924345 1.8554256 2.4472594 0.6113445 0.18559167 0.116925 0.228825 0.111900 0.0488539935 0.0005610685 FALSE TRUE
ENST00000683406 ENSG00000107099 No_inf pgKDN_inf DOCK8 protein_coding protein_coding_CDS_not_defined 124.1568 150.9487 117.9929 0.8373856 1.285755 -0.3553319 61.188655 75.317452 56.390782 1.5169671 1.6632398 -0.4174606 0.49267500 0.498950 0.478450 -0.020500 0.8616629899 0.0005610685 FALSE TRUE
ENST00000684637 ENSG00000107099 No_inf pgKDN_inf DOCK8 protein_coding retained_intron 124.1568 150.9487 117.9929 0.8373856 1.285755 -0.3553319 5.377135 13.433222 1.592077 0.3891671 0.5094512 -3.0688639 0.03767500 0.089000 0.013425 -0.075575 0.0005610685 0.0005610685 FALSE TRUE
MSTRG.28449.33 ENSG00000107099 No_inf pgKDN_inf DOCK8 protein_coding   124.1568 150.9487 117.9929 0.8373856 1.285755 -0.3553319 10.400246 15.575817 10.287053 0.1870684 1.9520983 -0.5980023 0.08054167 0.103225 0.086700 -0.016525 0.8338864712 0.0005610685 TRUE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

Help

Please Click HERE to learn more details about the results of IsoformSwitchAnalyzeR.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand pgKDN.inf No.inf log2fold_No.inf_pgKDN.inf
ENSG00000107099 E001 1.3702380 3.859129e-02 2.638139e-01 5.569771e-01 9 211249 211316 68 + 0.260 0.440 1.096
ENSG00000107099 E002 0.0000000       9 214854 214864 11 +      
ENSG00000107099 E003 0.0000000       9 214865 214867 3 +      
ENSG00000107099 E004 0.0000000       9 214868 215029 162 +      
ENSG00000107099 E005 0.0000000       9 215167 215170 4 +      
ENSG00000107099 E006 0.0000000       9 215171 215181 11 +      
ENSG00000107099 E007 0.0000000       9 215182 215416 235 +      
ENSG00000107099 E008 7.3165212 1.884658e-03 2.237936e-09 1.789003e-07 9 217776 218333 558 + 0.374 1.101 3.087
ENSG00000107099 E009 0.0000000       9 220748 220863 116 +      
ENSG00000107099 E010 1.2340429 1.592625e-02 7.757672e-01 9.138613e-01 9 270229 270375 147 + 0.321 0.365 0.266
ENSG00000107099 E011 0.6154789 1.844309e-02 8.395323e-01 9.424291e-01 9 271406 271442 37 + 0.189 0.219 0.266
ENSG00000107099 E012 7.9510887 1.890781e-03 3.208696e-01 6.138543e-01 9 271627 271729 103 + 1.001 0.904 -0.363
ENSG00000107099 E013 0.2537079 2.421378e-01 3.829108e-01   9 273046 273047 2 + 0.000 0.158 11.581
ENSG00000107099 E014 0.2537079 2.421378e-01 3.829108e-01   9 273048 273049 2 + 0.000 0.158 11.581
ENSG00000107099 E015 0.3713386 1.587214e-01 7.559233e-01   9 273050 273058 9 + 0.105 0.158 0.681
ENSG00000107099 E016 0.6164837 1.576890e-02 8.392315e-01 9.423532e-01 9 273059 273065 7 + 0.189 0.219 0.266
ENSG00000107099 E017 1.1084147 1.148481e-02 9.954829e-01 1.000000e+00 9 273066 273069 4 + 0.321 0.321 0.003
ENSG00000107099 E018 2.1897296 8.225410e-02 2.381063e-01 5.270705e-01 9 273070 273083 14 + 0.603 0.404 -0.972
ENSG00000107099 E019 4.3662424 1.800479e-02 3.042209e-02 1.640949e-01 9 273084 273100 17 + 0.863 0.585 -1.142
ENSG00000107099 E020 1.1271703 6.999930e-02 1.974267e-01 4.787117e-01 9 273998 274112 115 + 0.189 0.404 1.488
ENSG00000107099 E021 0.2541163 1.633118e-02 3.269476e-01   9 276926 276993 68 + 0.000 0.158 12.511
ENSG00000107099 E022 1.2347916 6.315602e-02 7.810351e-01 9.157207e-01 9 276994 277086 93 + 0.321 0.365 0.266
ENSG00000107099 E023 1.6317211 8.140808e-03 2.640957e-02 1.506770e-01 9 280710 280790 81 + 0.189 0.533 2.140
ENSG00000107099 E024 2.6109248 5.310826e-03 1.373975e-01 3.945478e-01 9 280791 280905 115 + 0.422 0.632 1.003
ENSG00000107099 E025 0.2545247 2.473879e-01 3.840661e-01   9 284375 284567 193 + 0.000 0.158 11.573
ENSG00000107099 E026 0.9870076 1.458707e-02 6.903623e-01 8.728562e-01 9 285274 285312 39 + 0.260 0.321 0.418
ENSG00000107099 E027 28.1627374 8.437868e-04 1.180608e-03 1.698632e-02 9 286461 286636 176 + 1.556 1.372 -0.632
ENSG00000107099 E028 18.8811720 1.344324e-03 9.717229e-04 1.468859e-02 9 289510 289581 72 + 1.408 1.183 -0.789
ENSG00000107099 E029 8.9105610 1.332731e-02 1.885962e-06 8.085648e-05 9 289582 291983 2402 + 0.603 1.151 2.128
ENSG00000107099 E030 32.0850285 9.815536e-03 3.572576e-03 3.929906e-02 9 304581 304704 124 + 1.615 1.422 -0.661
ENSG00000107099 E031 14.7965415 2.423727e-03 1.078570e-01 3.443020e-01 9 311954 311979 26 + 1.261 1.137 -0.438
ENSG00000107099 E032 41.9103855 3.404126e-04 7.788901e-06 2.751058e-04 9 311980 312166 187 + 1.735 1.527 -0.707
ENSG00000107099 E033 4.7803234 3.093595e-03 6.055021e-01 8.280558e-01 9 312167 313960 1794 + 0.792 0.731 -0.245
ENSG00000107099 E034 0.7434664 1.337531e-01 6.307015e-01 8.415074e-01 9 314292 314397 106 + 0.189 0.273 0.681
ENSG00000107099 E035 0.1170040 1.166307e-02 4.311802e-01   9 314398 314466 69 + 0.105 0.000 -12.784
ENSG00000107099 E036 28.4737415 4.743485e-04 1.246835e-02 9.263920e-02 9 317043 317128 86 + 1.539 1.400 -0.480
ENSG00000107099 E037 28.5784374 1.092761e-03 3.546980e-01 6.444386e-01 9 325671 325737 67 + 1.496 1.443 -0.183
ENSG00000107099 E038 0.0000000       9 325738 325756 19 +      
ENSG00000107099 E039 43.1957470 3.406316e-04 2.139722e-02 1.324680e-01 9 328022 328171 150 + 1.698 1.593 -0.360
ENSG00000107099 E040 32.1329430 1.338325e-02 4.144037e-01 6.946262e-01 9 332398 332478 81 + 1.550 1.489 -0.209
ENSG00000107099 E041 49.4422497 8.654766e-04 1.216302e-02 9.130134e-02 9 334225 334384 160 + 1.758 1.647 -0.376
ENSG00000107099 E042 46.4035976 4.009762e-04 4.009382e-02 1.940957e-01 9 336582 336718 137 + 1.722 1.630 -0.311
ENSG00000107099 E043 32.9131982 4.764483e-03 8.217385e-02 2.950905e-01 9 339006 339099 94 + 1.582 1.479 -0.351
ENSG00000107099 E044 41.9218596 4.040144e-03 1.054038e-02 8.316856e-02 9 340159 340321 163 + 1.701 1.565 -0.462
ENSG00000107099 E045 2.1029135 8.441994e-02 5.182077e-01 7.734461e-01 9 340322 340620 299 + 0.422 0.533 0.556
ENSG00000107099 E046 0.3706447 1.680874e-01 7.579604e-01   9 366238 366250 13 + 0.105 0.158 0.681
ENSG00000107099 E047 1.2234273 1.164724e-01 8.093023e-01 9.296360e-01 9 366251 366378 128 + 0.374 0.321 -0.319
ENSG00000107099 E048 1.4624054 1.081356e-02 3.455313e-01 6.365072e-01 9 366379 366552 174 + 0.464 0.321 -0.804
ENSG00000107099 E049 43.1575680 3.360301e-04 2.361334e-03 2.889861e-02 9 368018 368135 118 + 1.715 1.575 -0.474
ENSG00000107099 E050 1.6213676 1.874114e-01 2.277718e-01 5.162096e-01 9 368136 368300 165 + 0.260 0.504 1.417
ENSG00000107099 E051 6.8498221 9.360808e-03 1.259993e-02 9.332117e-02 9 368301 369221 921 + 0.708 0.990 1.096
ENSG00000107099 E052 2.3679184 6.719506e-03 1.056912e-01 3.402178e-01 9 369222 369447 226 + 0.374 0.609 1.166
ENSG00000107099 E053 1.6118951 1.084692e-02 3.175707e-01 6.103122e-01 9 369448 369663 216 + 0.321 0.473 0.851
ENSG00000107099 E054 3.8891509 3.671440e-03 8.726598e-04 1.350919e-02 9 369664 370229 566 + 0.374 0.826 2.059
ENSG00000107099 E055 34.5208319 4.158896e-04 1.654995e-04 3.584655e-03 9 370230 370300 71 + 1.645 1.453 -0.657
ENSG00000107099 E056 1.8680253 9.709422e-03 1.602174e-01 4.278652e-01 9 370301 371427 1127 + 0.321 0.533 1.141
ENSG00000107099 E057 47.1425095 1.724578e-03 6.081048e-04 1.017125e-02 9 371428 371566 139 + 1.762 1.602 -0.544
ENSG00000107099 E058 40.9526458 3.606345e-04 1.830250e-01 4.597270e-01 9 372185 372286 102 + 1.653 1.590 -0.215
ENSG00000107099 E059 39.0172413 1.016695e-03 2.325604e-02 1.392457e-01 9 376210 376305 96 + 1.659 1.546 -0.382
ENSG00000107099 E060 59.0467570 2.618145e-04 6.163853e-04 1.024148e-02 9 376977 377211 235 + 1.846 1.711 -0.457
ENSG00000107099 E061 0.1186381 1.174445e-02 4.311175e-01   9 379749 379770 22 + 0.105 0.000 -12.782
ENSG00000107099 E062 45.5782779 3.206182e-04 5.906650e-02 2.438685e-01 9 379771 379935 165 + 1.710 1.625 -0.288
ENSG00000107099 E063 4.6186724 1.398593e-02 1.578689e-02 1.087837e-01 9 380279 381387 1109 + 0.539 0.853 1.318
ENSG00000107099 E064 56.7398626 1.295742e-03 4.559796e-02 2.089626e-01 9 382513 382685 173 + 1.803 1.718 -0.288
ENSG00000107099 E065 41.0009818 3.544532e-04 1.805126e-02 1.185554e-01 9 386331 386426 96 + 1.679 1.567 -0.379
ENSG00000107099 E066 40.3624351 3.669394e-04 1.192918e-02 9.017285e-02 9 390471 390566 96 + 1.676 1.557 -0.406
ENSG00000107099 E067 80.1857412 2.494014e-03 5.850831e-01 8.156712e-01 9 396785 396934 150 + 1.918 1.895 -0.075
ENSG00000107099 E068 75.5053126 2.918869e-04 3.748098e-01 6.625042e-01 9 399146 399259 114 + 1.897 1.865 -0.107
ENSG00000107099 E069 0.6340457 1.779348e-01 6.108142e-02 2.482005e-01 9 399260 399770 511 + 0.000 0.321 13.002
ENSG00000107099 E070 85.7294546 1.861830e-04 1.021294e-01 3.339600e-01 9 404918 405073 156 + 1.964 1.910 -0.183
ENSG00000107099 E071 0.2539903 1.594798e-02 3.270089e-01   9 405074 405099 26 + 0.000 0.158 12.517
ENSG00000107099 E072 61.1862056 2.406910e-04 1.134010e-01 3.542936e-01 9 406930 407018 89 + 1.824 1.762 -0.209
ENSG00000107099 E073 44.3684493 3.188020e-04 7.968954e-02 2.896795e-01 9 407019 407069 51 + 1.696 1.616 -0.271
ENSG00000107099 E074 84.7871888 3.643289e-03 8.379600e-01 9.420042e-01 9 414782 414951 170 + 1.935 1.925 -0.034
ENSG00000107099 E075 77.5030407 1.329258e-03 7.319154e-01 8.933865e-01 9 418068 418207 140 + 1.883 1.895 0.040
ENSG00000107099 E076 0.5078243 2.130098e-01 1.160089e-01 3.591747e-01 9 420116 420180 65 + 0.000 0.273 12.617
ENSG00000107099 E077 85.5320975 3.249678e-04 5.477668e-01 7.931778e-01 9 420401 420583 183 + 1.944 1.923 -0.070
ENSG00000107099 E078 79.4775225 1.903700e-04 3.844742e-03 4.132369e-02 9 420949 421078 130 + 1.955 1.856 -0.332
ENSG00000107099 E079 86.0534629 3.422443e-03 5.389194e-03 5.231461e-02 9 422048 422135 88 + 1.996 1.883 -0.381
ENSG00000107099 E080 85.1784812 1.607876e-03 6.602875e-01 8.582640e-01 9 426885 426981 97 + 1.940 1.923 -0.056
ENSG00000107099 E081 112.3227543 2.793271e-03 7.496187e-01 9.013656e-01 9 428362 428496 135 + 2.057 2.045 -0.040
ENSG00000107099 E082 114.9482426 1.759625e-04 7.143571e-02 2.708465e-01 9 429702 429854 153 + 2.089 2.037 -0.174
ENSG00000107099 E083 141.6515928 1.272174e-04 1.679161e-02 1.130212e-01 9 432166 432324 159 + 2.184 2.122 -0.207
ENSG00000107099 E084 60.2534681 1.724041e-03 2.674859e-01 5.608656e-01 9 433875 433920 46 + 1.809 1.762 -0.160
ENSG00000107099 E085 59.6879300 2.445379e-04 5.537288e-01 7.967987e-01 9 433921 433975 55 + 1.792 1.768 -0.081
ENSG00000107099 E086 103.8834250 3.473306e-04 3.729288e-01 6.606084e-01 9 434783 434975 193 + 2.032 2.004 -0.093
ENSG00000107099 E087 80.5207769 6.366616e-03 3.366554e-01 6.286673e-01 9 439245 439388 144 + 1.933 1.885 -0.161
ENSG00000107099 E088 12.4031671 1.086039e-03 4.142338e-08 2.619142e-06 9 440382 441285 904 + 0.772 1.273 1.851
ENSG00000107099 E089 124.8045270 8.148966e-04 9.973029e-01 1.000000e+00 9 441286 441417 132 + 2.095 2.095 -0.002
ENSG00000107099 E090 121.9724889 1.498434e-04 8.890500e-01 9.630018e-01 9 441875 442009 135 + 2.088 2.083 -0.015
ENSG00000107099 E091 104.9816872 5.077422e-04 8.617647e-01 9.521763e-01 9 443427 443516 90 + 2.024 2.018 -0.021
ENSG00000107099 E092 218.1716489 8.234860e-05 1.100138e-01 3.481018e-01 9 446370 446606 237 + 2.317 2.350 0.107
ENSG00000107099 E093 156.0008571 1.228866e-04 5.452657e-01 7.912919e-01 9 449784 449927 144 + 2.183 2.197 0.047
ENSG00000107099 E094 141.1178545 1.385028e-04 2.067854e-02 1.295594e-01 9 452011 452117 107 + 2.113 2.172 0.198
ENSG00000107099 E095 0.0000000       9 456525 456897 373 +      
ENSG00000107099 E096 93.0469499 2.040851e-04 2.879536e-03 3.348759e-02 9 463517 463554 38 + 1.912 2.007 0.319
ENSG00000107099 E097 221.8217942 2.961375e-04 3.842987e-02 1.893893e-01 9 463555 463687 133 + 2.318 2.361 0.145
ENSG00000107099 E098 193.2163709 1.602169e-04 3.328035e-01 6.249157e-01 9 464159 464278 120 + 2.272 2.292 0.069
ENSG00000107099 E099 931.5247985 3.399999e-05 4.194557e-29 2.332260e-26 9 464279 465072 794 + 2.902 3.007 0.348
ENSG00000107099 E100 160.1203010 1.180191e-04 9.693283e-07 4.534237e-05 9 465073 465428 356 + 2.130 2.250 0.399

Help

Please Click HERE to learn more details about the results from DEXseq.