ENSG00000114745

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

  • Note:

    • About the Coding Potential: Please check the spreadsheet in the “Results” tag to confirm the coding potential. The above figure only show the predicted coding potential. The “gene_biotype” in the result spreadsheet is from the database record. Therefore, if you find conflicts between “gene_biotype” and “codingPotential”, please trust the “gene_biotype”.

    • Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

    • For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000479124 ENSG00000114745 No_inf pgKDN_inf GORASP1 protein_coding retained_intron 20.3143 29.02108 12.95861 1.364919 0.4869621 -1.162575 1.0635292 1.736849 0.7054224 1.0437526 0.2956489 -1.2878877 0.05391667 0.062500 0.057000 -0.005500 8.688024e-01 4.924449e-08 FALSE TRUE
ENST00000479927 ENSG00000114745 No_inf pgKDN_inf GORASP1 protein_coding protein_coding 20.3143 29.02108 12.95861 1.364919 0.4869621 -1.162575 1.0029036 1.503722 1.2802129 0.1850216 0.3719772 -0.2304914 0.05334167 0.052850 0.097500 0.044650 7.928566e-01 4.924449e-08 FALSE TRUE
ENST00000486133 ENSG00000114745 No_inf pgKDN_inf GORASP1 protein_coding retained_intron 20.3143 29.02108 12.95861 1.364919 0.4869621 -1.162575 4.7602956 8.651912 0.0000000 1.7890611 0.0000000 -9.7585416 0.16998333 0.291575 0.000000 -0.291575 4.924449e-08 4.924449e-08   FALSE
ENST00000695443 ENSG00000114745 No_inf pgKDN_inf GORASP1 protein_coding retained_intron 20.3143 29.02108 12.95861 1.364919 0.4869621 -1.162575 0.8948662 2.161766 0.3010289 1.2500598 0.3010289 -2.8037483 0.03774167 0.073600 0.021325 -0.052275 8.460906e-01 4.924449e-08 FALSE TRUE
ENST00000695589 ENSG00000114745 No_inf pgKDN_inf GORASP1 protein_coding protein_coding_CDS_not_defined 20.3143 29.02108 12.95861 1.364919 0.4869621 -1.162575 0.6677754 2.003326 0.0000000 0.9441774 0.0000000 -7.6534372 0.02360000 0.070800 0.000000 -0.070800 2.374882e-01 4.924449e-08 FALSE TRUE
ENST00000695591 ENSG00000114745 No_inf pgKDN_inf GORASP1 protein_coding protein_coding 20.3143 29.02108 12.95861 1.364919 0.4869621 -1.162575 0.2158526 0.000000 0.6475577 0.0000000 0.6475577 6.0390456 0.01673333 0.000000 0.050200 0.050200 7.726067e-01 4.924449e-08 FALSE TRUE
ENST00000695592 ENSG00000114745 No_inf pgKDN_inf GORASP1 protein_coding protein_coding_CDS_not_defined 20.3143 29.02108 12.95861 1.364919 0.4869621 -1.162575 6.5061921 4.667924 7.5290308 0.8755924 1.0952030 0.6885106 0.38850833 0.160800 0.574225 0.413425 1.229070e-03 4.924449e-08 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

Help

Please Click HERE to learn more details about the results of IsoformSwitchAnalyzeR.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand pgKDN.inf No.inf log2fold_No.inf_pgKDN.inf
ENSG00000114745 E001 0.0000000       3 39095222 39096598 1377 -      
ENSG00000114745 E002 0.0000000       3 39096599 39096613 15 -      
ENSG00000114745 E003 0.0000000       3 39096614 39096614 1 -      
ENSG00000114745 E004 0.0000000       3 39096615 39096621 7 -      
ENSG00000114745 E005 0.0000000       3 39096622 39096623 2 -      
ENSG00000114745 E006 0.0000000       3 39096624 39096633 10 -      
ENSG00000114745 E007 0.0000000       3 39096634 39096636 3 -      
ENSG00000114745 E008 0.0000000       3 39096637 39096641 5 -      
ENSG00000114745 E009 0.0000000       3 39096642 39096643 2 -      
ENSG00000114745 E010 0.0000000       3 39096644 39096658 15 -      
ENSG00000114745 E011 0.0000000       3 39096659 39096664 6 -      
ENSG00000114745 E012 0.0000000       3 39096665 39096673 9 -      
ENSG00000114745 E013 0.7331709 0.014284764 0.4298167779 0.707938861 3 39096674 39096679 6 - 0.305 0.184 -0.946
ENSG00000114745 E014 0.7331709 0.014284764 0.4298167779 0.707938861 3 39096680 39096681 2 - 0.305 0.184 -0.946
ENSG00000114745 E015 0.8600249 0.012829284 0.6365806968 0.844885635 3 39096682 39096683 2 - 0.305 0.232 -0.531
ENSG00000114745 E016 0.8600249 0.012829284 0.6365806968 0.844885635 3 39096684 39096691 8 - 0.305 0.232 -0.531
ENSG00000114745 E017 3.3539100 0.006339606 0.6223915390 0.837327287 3 39096692 39096715 24 - 0.570 0.639 0.302
ENSG00000114745 E018 3.6081826 0.034790675 0.5030761388 0.762653076 3 39096716 39096722 7 - 0.570 0.672 0.447
ENSG00000114745 E019 4.0864569 0.061541300 0.9287135646 0.978917241 3 39096723 39096730 8 - 0.675 0.688 0.055
ENSG00000114745 E020 4.0864569 0.061541300 0.9287135646 0.978917241 3 39096731 39096732 2 - 0.675 0.688 0.055
ENSG00000114745 E021 30.8628076 0.002651637 0.7946620738 0.921800663 3 39096733 39096967 235 - 1.465 1.481 0.054
ENSG00000114745 E022 20.2247228 0.013824679 0.6096626156 0.830174629 3 39096968 39097034 67 - 1.271 1.313 0.148
ENSG00000114745 E023 56.6534838 0.000299217 0.6711871251 0.863586202 3 39097035 39097451 417 - 1.721 1.739 0.059
ENSG00000114745 E024 54.2548606 0.000626482 0.1404230153 0.398756116 3 39097452 39097875 424 - 1.754 1.695 -0.200
ENSG00000114745 E025 56.9535737 0.004387551 0.1171689489 0.361459137 3 39097876 39098489 614 - 1.781 1.711 -0.237
ENSG00000114745 E026 0.2539903 0.016010982 0.5677380749   3 39098490 39098740 251 - 0.000 0.131 11.756
ENSG00000114745 E027 10.0050293 0.001430564 0.4379072996 0.714141639 3 39098741 39098815 75 - 1.062 0.992 -0.256
ENSG00000114745 E028 7.8043067 0.003180850 0.8961492597 0.965846972 3 39098816 39098853 38 - 0.928 0.915 -0.048
ENSG00000114745 E029 7.2274218 0.002217381 0.1754239147 0.449429393 3 39098854 39098893 40 - 0.785 0.934 0.573
ENSG00000114745 E030 1.6233844 0.009434890 0.3890978472 0.674973571 3 39098894 39099167 274 - 0.305 0.441 0.791
ENSG00000114745 E031 1.5954019 0.008411629 0.3770921162 0.664171084 3 39099168 39099352 185 - 0.483 0.349 -0.724
ENSG00000114745 E032 17.0524137 0.007589805 0.3291950629 0.621645129 3 39099353 39099503 151 - 1.279 1.204 -0.265
ENSG00000114745 E033 14.3750163 0.017533761 0.0333018763 0.173452886 3 39100305 39100434 130 - 1.279 1.089 -0.674
ENSG00000114745 E034 7.4495942 0.028876042 0.7381626464 0.896079777 3 39100435 39100453 19 - 0.873 0.915 0.163
ENSG00000114745 E035 5.8354971 0.026919184 0.7767208841 0.914226008 3 39100454 39100454 1 - 0.785 0.822 0.146
ENSG00000114745 E036 4.9803822 0.003233881 0.3710810176 0.659121000 3 39100455 39100456 2 - 0.676 0.786 0.452
ENSG00000114745 E037 7.1131885 0.002212365 0.1189731859 0.364561220 3 39100457 39100503 47 - 0.760 0.934 0.673
ENSG00000114745 E038 2.6295193 0.010231906 0.1329087799 0.387099154 3 39100504 39100746 243 - 0.373 0.602 1.141
ENSG00000114745 E039 4.4641540 0.003536532 0.9198924716 0.975031383 3 39100747 39100787 41 - 0.706 0.719 0.054
ENSG00000114745 E040 6.9171268 0.008474911 0.6111586816 0.830870497 3 39100788 39100850 63 - 0.910 0.856 -0.209
ENSG00000114745 E041 3.6490332 0.013997952 0.0162557073 0.110768833 3 39100851 39100877 27 - 0.831 0.518 -1.333
ENSG00000114745 E042 2.1223025 0.006796802 0.3449400928 0.635968925 3 39100878 39101015 138 - 0.373 0.518 0.754
ENSG00000114745 E043 7.8917054 0.002019704 0.4147613315 0.694992937 3 39101016 39101102 87 - 0.977 0.896 -0.304
ENSG00000114745 E044 2.1216634 0.007166742 0.3461284948 0.636989048 3 39101103 39101182 80 - 0.373 0.518 0.754
ENSG00000114745 E045 7.7561099 0.002591248 0.0236885477 0.140784367 3 39101183 39101509 327 - 0.734 0.984 0.968
ENSG00000114745 E046 2.3657454 0.020658587 0.4788803790 0.744806425 3 39101510 39101570 61 - 0.431 0.540 0.539
ENSG00000114745 E047 13.7901890 0.007105184 0.0001863866 0.003944948 3 39101571 39102677 1107 - 0.872 1.232 1.314
ENSG00000114745 E048 2.8363674 0.005566732 0.6213752399 0.836681157 3 39102678 39102692 15 - 0.608 0.540 -0.309
ENSG00000114745 E049 9.5001129 0.001767644 0.3802519733 0.666813302 3 39102693 39102839 147 - 1.049 0.968 -0.298
ENSG00000114745 E050 3.8345157 0.003891790 0.8775564355 0.958435138 3 39102840 39102875 36 - 0.676 0.656 -0.084
ENSG00000114745 E051 2.3193604 0.006972314 0.1036271875 0.336465519 3 39102876 39102881 6 - 0.643 0.413 -1.098
ENSG00000114745 E052 0.3809057 0.015803753 0.3067408241   3 39102882 39102926 45 - 0.000 0.184 12.280
ENSG00000114745 E053 0.3707734 0.016803001 1.0000000000   3 39102927 39102951 25 - 0.127 0.131 0.054
ENSG00000114745 E054 0.3810317 0.027885291 0.3092314877   3 39102952 39102999 48 - 0.000 0.184 12.258
ENSG00000114745 E055 1.3612679 0.009460272 0.8778098642 0.958506868 3 39103000 39103107 108 - 0.373 0.349 -0.139
ENSG00000114745 E056 2.3866096 0.005893783 0.0744026673 0.278100133 3 39103108 39103472 365 - 0.305 0.582 1.469
ENSG00000114745 E057 4.9316073 0.013979761 0.4666768293 0.735329135 3 39103473 39103547 75 - 0.809 0.719 -0.361
ENSG00000114745 E058 2.6217499 0.011260362 0.3140525773 0.607144301 3 39103548 39103553 6 - 0.431 0.582 0.732
ENSG00000114745 E059 1.2606644 0.009799294 0.0794774837 0.289178464 3 39103554 39103725 172 - 0.127 0.413 2.224
ENSG00000114745 E060 1.3782305 0.010828351 0.2448344046 0.535239706 3 39106386 39106567 182 - 0.225 0.413 1.224
ENSG00000114745 E061 0.7518025 0.309793819 0.5318980692 0.782363921 3 39106568 39106634 67 - 0.127 0.274 1.374
ENSG00000114745 E062 0.1272623 0.012278848 1.0000000000   3 39106969 39106987 19 - 0.000 0.071 10.838
ENSG00000114745 E063 0.1272623 0.012278848 1.0000000000   3 39106988 39106992 5 - 0.000 0.071 10.838
ENSG00000114745 E064 0.1272623 0.012278848 1.0000000000   3 39106993 39107182 190 - 0.000 0.071 10.838
ENSG00000114745 E065 0.3806233 0.016405227 0.3066072006   3 39107183 39107478 296 - 0.000 0.184 12.279
ENSG00000114745 E066 5.8331293 0.002545747 0.7479686816 0.900575177 3 39107479 39108063 585 - 0.785 0.822 0.147
ENSG00000114745 E067 0.0000000       3 39108215 39108369 155 -      

Help

Please Click HERE to learn more details about the results from DEXseq.