ENSG00000115275

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

  • Note:

    • About the Coding Potential: Please check the spreadsheet in the “Results” tag to confirm the coding potential. The above figure only show the predicted coding potential. The “gene_biotype” in the result spreadsheet is from the database record. Therefore, if you find conflicts between “gene_biotype” and “codingPotential”, please trust the “gene_biotype”.

    • Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

    • For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000448666 ENSG00000115275 No_inf pgKDN_inf MOGS protein_coding protein_coding 44.4871 38.06188 44.20163 1.197621 1.449509 0.2157 3.707909 0.000000 6.8698746 0.0000000 1.6815043 9.4262384 0.08029167 0.00000 0.155675 0.155675 8.877987e-08 8.877987e-08 FALSE TRUE
ENST00000462189 ENSG00000115275 No_inf pgKDN_inf MOGS protein_coding retained_intron 44.4871 38.06188 44.20163 1.197621 1.449509 0.2157 5.102066 7.154567 3.7284249 1.1569920 0.6072724 -0.9384490 0.11898333 0.18660 0.084200 -0.102400 2.310401e-01 8.877987e-08 FALSE TRUE
ENST00000648768 ENSG00000115275 No_inf pgKDN_inf MOGS protein_coding retained_intron 44.4871 38.06188 44.20163 1.197621 1.449509 0.2157 3.586648 5.788439 2.0541915 0.9832041 0.6631918 -1.4900878 0.08500000 0.15060 0.047000 -0.103600 1.509163e-01 8.877987e-08 FALSE TRUE
ENST00000648810 ENSG00000115275 No_inf pgKDN_inf MOGS protein_coding protein_coding 44.4871 38.06188 44.20163 1.197621 1.449509 0.2157 17.137322 12.254389 18.5862729 0.9402742 1.0785472 0.6005381 0.38040833 0.32155 0.420250 0.098700 4.956302e-01 8.877987e-08 FALSE TRUE
ENST00000649777 ENSG00000115275 No_inf pgKDN_inf MOGS protein_coding retained_intron 44.4871 38.06188 44.20163 1.197621 1.449509 0.2157 2.466356 2.392041 0.8349177 1.1252949 0.2092126 -1.5073783 0.05440833 0.06065 0.019150 -0.041500 5.678274e-01 8.877987e-08 FALSE TRUE
MSTRG.16594.16 ENSG00000115275 No_inf pgKDN_inf MOGS protein_coding   44.4871 38.06188 44.20163 1.197621 1.449509 0.2157 7.166117 5.344891 7.2314158 1.7913897 0.7897053 0.4354147 0.16119167 0.14445 0.165075 0.020625 8.730683e-01 8.877987e-08 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

Help

Please Click HERE to learn more details about the results of IsoformSwitchAnalyzeR.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand pgKDN.inf No.inf log2fold_No.inf_pgKDN.inf
ENSG00000115275 E001 0.0000000       2 74461057 74461068 12 -      
ENSG00000115275 E002 0.1176306 0.0117237261 0.5509774045   2 74461069 74461069 1 - 0.094 0.000 -8.735
ENSG00000115275 E003 1.9439217 0.0075270647 0.3443794767 0.635674140 2 74461070 74461101 32 - 0.534 0.395 -0.703
ENSG00000115275 E004 2.1896961 0.0065772504 0.3758516927 0.663129219 2 74461102 74461105 4 - 0.564 0.437 -0.619
ENSG00000115275 E005 2.6893659 0.0141123168 0.7165521199 0.885736557 2 74461106 74461117 12 - 0.591 0.541 -0.230
ENSG00000115275 E006 2.6893659 0.0141123168 0.7165521199 0.885736557 2 74461118 74461119 2 - 0.591 0.541 -0.230
ENSG00000115275 E007 2.6893659 0.0141123168 0.7165521199 0.885736557 2 74461120 74461125 6 - 0.591 0.541 -0.230
ENSG00000115275 E008 4.7147943 0.0035889520 0.0198695969 0.126462927 2 74461126 74461178 53 - 0.877 0.599 -1.136
ENSG00000115275 E009 2.8886943 0.0103731042 0.0171484358 0.114508324 2 74461179 74461183 5 - 0.729 0.395 -1.551
ENSG00000115275 E010 3.5058723 0.0051692477 0.0485722170 0.217095712 2 74461184 74461222 39 - 0.766 0.509 -1.118
ENSG00000115275 E011 2.7966812 0.0063104060 0.3308979843 0.623155687 2 74461223 74461257 35 - 0.642 0.509 -0.604
ENSG00000115275 E012 2.8280004 0.0058293260 0.5005648786 0.760593886 2 74461258 74461274 17 - 0.534 0.625 0.412
ENSG00000115275 E013 87.4007390 0.0001824735 0.2756504579 0.569257508 2 74461275 74461639 365 - 1.929 1.962 0.110
ENSG00000115275 E014 93.9713388 0.0003026125 0.0520459306 0.226506550 2 74461640 74461933 294 - 1.947 2.004 0.192
ENSG00000115275 E015 78.2207155 0.0011237699 0.3908133840 0.676126567 2 74461934 74462180 247 - 1.914 1.884 -0.102
ENSG00000115275 E016 42.8627702 0.0012540836 0.1612168382 0.429358520 2 74462181 74462278 98 - 1.674 1.609 -0.222
ENSG00000115275 E017 118.2614783 0.0002831946 0.8997474032 0.967347283 2 74462279 74462773 495 - 2.075 2.078 0.010
ENSG00000115275 E018 16.2227129 0.0008861655 0.1754289171 0.449429393 2 74462774 74462793 20 - 1.184 1.281 0.341
ENSG00000115275 E019 16.9799692 0.0008256935 0.0941031450 0.319293571 2 74462794 74462834 41 - 1.191 1.308 0.412
ENSG00000115275 E020 25.4873131 0.0005354314 0.6493508733 0.852243393 2 74462835 74462960 126 - 1.410 1.435 0.089
ENSG00000115275 E021 16.4615481 0.0008257886 0.2499734903 0.540933766 2 74462961 74462996 36 - 1.282 1.200 -0.288
ENSG00000115275 E022 14.7562276 0.0009397960 0.2949302219 0.588202736 2 74462997 74463012 16 - 1.236 1.158 -0.278
ENSG00000115275 E023 5.9902316 0.0026579995 0.0003367424 0.006390523 2 74463013 74463189 177 - 0.591 0.996 1.618
ENSG00000115275 E024 20.3532703 0.0006937515 0.1405002604 0.398849468 2 74463190 74463219 30 - 1.376 1.281 -0.331
ENSG00000115275 E025 26.4146934 0.0005066154 0.7122798725 0.883805251 2 74463220 74463331 112 - 1.449 1.427 -0.073
ENSG00000115275 E026 11.8990381 0.0144592425 0.7205192371 0.887441621 2 74463332 74463379 48 - 1.092 1.127 0.123
ENSG00000115275 E027 8.5418852 0.0150637353 0.4349220726 0.711921062 2 74463380 74463386 7 - 1.019 0.938 -0.298
ENSG00000115275 E028 3.8376261 0.0037084326 0.0936906382 0.318306197 2 74463387 74463646 260 - 0.564 0.775 0.896
ENSG00000115275 E029 1.3512642 0.0095549621 0.7364195112 0.895409748 2 74464417 74464495 79 - 0.344 0.395 0.297
ENSG00000115275 E030 20.8462203 0.0006652094 0.6419731961 0.848133019 2 74464496 74464665 170 - 1.324 1.353 0.101
ENSG00000115275 E031 10.0836367 0.0013497279 0.2274231536 0.515804894 2 74464666 74464722 57 - 0.987 1.093 0.387
ENSG00000115275 E032 2.4787164 0.0428089101 0.2139758331 0.499182115 2 74464723 74464895 173 - 0.430 0.625 0.927
ENSG00000115275 E033 15.0438355 0.0008809470 0.7518393551 0.902267451 2 74464896 74464987 92 - 1.217 1.193 -0.084
ENSG00000115275 E034 14.6986540 0.0009633095 0.8953876093 0.965489130 2 74464988 74465081 94 - 1.191 1.200 0.034
ENSG00000115275 E035 16.9105390 0.0011328869 0.0485439307 0.216987267 2 74465082 74465313 232 - 1.319 1.179 -0.491
ENSG00000115275 E036 0.9603835 0.0209648128 0.1664419635 0.436703681 2 74465314 74465410 97 - 0.389 0.175 -1.551

Help

Please Click HERE to learn more details about the results from DEXseq.