ENSG00000115677

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

  • Note:

    • About the Coding Potential: Please check the spreadsheet in the “Results” tag to confirm the coding potential. The above figure only show the predicted coding potential. The “gene_biotype” in the result spreadsheet is from the database record. Therefore, if you find conflicts between “gene_biotype” and “codingPotential”, please trust the “gene_biotype”.

    • Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

    • For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000391976 ENSG00000115677 No_inf pgKDN_inf HDLBP protein_coding protein_coding 140.6812 127.8242 138.1134 4.757975 4.12765 0.1116834 77.205724 45.90432 97.413142 2.480054 1.845409 1.085320 0.54586667 0.3619 0.706475 0.344575 9.688567e-12 9.688567e-12 FALSE TRUE
ENST00000442730 ENSG00000115677 No_inf pgKDN_inf HDLBP protein_coding protein_coding 140.6812 127.8242 138.1134 4.757975 4.12765 0.1116834 8.096399 16.25119 4.633421 2.322507 1.695086 -1.808173 0.06039167 0.1261 0.033775 -0.092325 2.017296e-01 9.688567e-12 FALSE TRUE
ENST00000470482 ENSG00000115677 No_inf pgKDN_inf HDLBP protein_coding protein_coding_CDS_not_defined 140.6812 127.8242 138.1134 4.757975 4.12765 0.1116834 8.580711 14.45345 0.000000 4.849578 0.000000 -10.498196 0.05996667 0.1098 0.000000 -0.109800 2.736623e-03 9.688567e-12   FALSE
ENST00000483086 ENSG00000115677 No_inf pgKDN_inf HDLBP protein_coding protein_coding_CDS_not_defined 140.6812 127.8242 138.1134 4.757975 4.12765 0.1116834 10.411027 11.73595 8.057200 4.269953 2.737530 -0.542023 0.07445000 0.0937 0.056700 -0.037000 9.133278e-01 9.688567e-12 TRUE TRUE
ENST00000484412 ENSG00000115677 No_inf pgKDN_inf HDLBP protein_coding protein_coding_CDS_not_defined 140.6812 127.8242 138.1134 4.757975 4.12765 0.1116834 9.617034 11.03181 1.741435 4.005428 1.741435 -2.656367 0.06653333 0.0851 0.012300 -0.072800 1.883243e-01 9.688567e-12 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

Help

Please Click HERE to learn more details about the results of IsoformSwitchAnalyzeR.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand pgKDN.inf No.inf log2fold_No.inf_pgKDN.inf
ENSG00000115677 E001 0.2539903 0.0160385857 1.353962e-01   2 241227264 241227266 3 - 0.000 0.203 11.391
ENSG00000115677 E002 0.2539903 0.0160385857 1.353962e-01   2 241227267 241227290 24 - 0.000 0.203 14.292
ENSG00000115677 E003 55.0247290 0.0002628956 3.138908e-22 1.051515e-19 2 241227291 241229211 1921 - 1.529 1.929 1.355
ENSG00000115677 E004 5.2555094 0.0027767737 2.690983e-01 5.626496e-01 2 241229212 241229223 12 - 0.735 0.860 0.497
ENSG00000115677 E005 113.6462597 0.0004612395 1.305401e-02 9.565963e-02 2 241229224 241229438 215 - 2.021 2.095 0.247
ENSG00000115677 E006 55.6328635 0.0002778599 4.251281e-01 7.041960e-01 2 241229439 241229461 23 - 1.734 1.767 0.112
ENSG00000115677 E007 57.8514226 0.0002484243 1.802795e-02 1.184744e-01 2 241229462 241229482 21 - 1.722 1.817 0.320
ENSG00000115677 E008 185.1858445 0.0001045761 3.063599e-04 5.903257e-03 2 241229483 241229687 205 - 2.229 2.310 0.270
ENSG00000115677 E009 1.4872738 0.0118717333 7.127036e-02 2.705151e-01 2 241229688 241229832 145 - 0.257 0.529 1.564
ENSG00000115677 E010 146.0209475 0.0001132860 2.411561e-03 2.931376e-02 2 241229833 241229961 129 - 2.128 2.205 0.257
ENSG00000115677 E011 1.1098305 0.0779377662 4.005587e-01 6.839551e-01 2 241229962 241230068 107 - 0.257 0.396 0.885
ENSG00000115677 E012 0.9803335 0.5840695972 9.864650e-01 9.993426e-01 2 241230069 241230152 84 - 0.256 0.341 0.566
ENSG00000115677 E013 63.6256466 0.0002224847 1.284583e-01 3.800228e-01 2 241230153 241230176 24 - 1.779 1.838 0.197
ENSG00000115677 E014 65.0656228 0.0002264016 1.529454e-01 4.172700e-01 2 241230177 241230203 27 - 1.791 1.845 0.184
ENSG00000115677 E015 91.2872710 0.0024303070 4.874301e-01 7.509013e-01 2 241230204 241230269 66 - 1.948 1.975 0.091
ENSG00000115677 E016 66.7720809 0.0047318335 8.360267e-01 9.411575e-01 2 241230759 241230774 16 - 1.821 1.832 0.038
ENSG00000115677 E017 195.1806023 0.0001514037 8.847615e-01 9.611682e-01 2 241230775 241230938 164 - 2.286 2.289 0.013
ENSG00000115677 E018 56.4473693 0.0002992053 8.059364e-01 9.281010e-01 2 241230939 241230944 6 - 1.749 1.760 0.036
ENSG00000115677 E019 2.5750463 0.0053297263 2.740618e-01 5.676355e-01 2 241230945 241231343 399 - 0.479 0.631 0.702
ENSG00000115677 E020 58.2249922 0.0045028198 8.368507e-01 9.415421e-01 2 241233820 241233852 33 - 1.771 1.762 -0.029
ENSG00000115677 E021 100.7173979 0.0001662009 3.833692e-02 1.890522e-01 2 241233853 241233963 111 - 1.974 2.038 0.213
ENSG00000115677 E022 73.8323462 0.0006530930 1.835782e-02 1.197626e-01 2 241235121 241235184 64 - 1.830 1.917 0.291
ENSG00000115677 E023 47.1740830 0.0066316518 2.724921e-01 5.662202e-01 2 241235185 241235204 20 - 1.650 1.713 0.212
ENSG00000115677 E024 70.6626569 0.0059061892 4.084923e-02 1.961085e-01 2 241235205 241235255 51 - 1.806 1.904 0.330
ENSG00000115677 E025 0.5074127 0.0158066332 1.700566e-02 1.138365e-01 2 241235256 241235275 20 - 0.000 0.341 15.259
ENSG00000115677 E026 2.3667507 0.0062463366 3.715838e-03 4.034636e-02 2 241235276 241235489 214 - 0.302 0.713 2.049
ENSG00000115677 E027 109.5834125 0.0022681731 7.318326e-03 6.505796e-02 2 241235490 241235594 105 - 1.997 2.090 0.313
ENSG00000115677 E028 0.6088063 0.0218094460 9.864504e-01 9.993426e-01 2 241235595 241235629 35 - 0.205 0.203 -0.021
ENSG00000115677 E029 2.3517759 0.0530152356 7.608640e-02 2.819104e-01 2 241236108 241236614 507 - 0.382 0.660 1.341
ENSG00000115677 E030 135.7600606 0.0001153262 4.561764e-03 4.643160e-02 2 241236615 241236769 155 - 2.098 2.172 0.249
ENSG00000115677 E031 0.8720163 0.0130546432 1.003486e-01 3.308572e-01 2 241236770 241236771 2 - 0.147 0.396 1.886
ENSG00000115677 E032 1.6333881 0.0081615949 1.131856e-03 1.647207e-02 2 241238293 241238648 356 - 0.147 0.631 3.024
ENSG00000115677 E033 56.6293624 0.0062734016 8.920715e-01 9.641748e-01 2 241238649 241238678 30 - 1.759 1.751 -0.026
ENSG00000115677 E034 96.9665870 0.0001696164 6.534715e-01 8.544081e-01 2 241238679 241238787 109 - 1.991 1.978 -0.045
ENSG00000115677 E035 148.2287630 0.0010632365 3.869285e-02 1.902854e-01 2 241239602 241239810 209 - 2.192 2.134 -0.194
ENSG00000115677 E036 40.9728085 0.0003364046 1.900045e-03 2.460614e-02 2 241239811 241239820 10 - 1.675 1.524 -0.513
ENSG00000115677 E037 74.5515267 0.0005965846 3.489727e-02 1.786907e-01 2 241239901 241239991 91 - 1.904 1.827 -0.260
ENSG00000115677 E038 42.6267833 0.0028770311 5.761597e-01 8.104585e-01 2 241239992 241240017 26 - 1.646 1.618 -0.097
ENSG00000115677 E039 68.0092457 0.0015571198 5.103918e-02 2.236551e-01 2 241240018 241240122 105 - 1.865 1.786 -0.266
ENSG00000115677 E040 0.9778155 0.0198082734 5.899552e-01 8.184443e-01 2 241240123 241240164 42 - 0.257 0.341 0.564
ENSG00000115677 E041 119.3107807 0.0001618885 3.781892e-01 6.652660e-01 2 241242460 241242678 219 - 2.085 2.061 -0.081
ENSG00000115677 E042 1.3788285 0.1261350577 1.575707e-02 1.086615e-01 2 241242679 241242790 112 - 0.147 0.566 2.735
ENSG00000115677 E043 1.1154009 0.0109074893 1.162175e-01 3.593874e-01 2 241243549 241243688 140 - 0.205 0.445 1.564
ENSG00000115677 E044 0.4914576 0.0158023171 6.998172e-01   2 241246570 241246663 94 - 0.147 0.203 0.564
ENSG00000115677 E045 0.6175562 0.0198223011 3.837655e-01 6.698601e-01 2 241246664 241246751 88 - 0.147 0.277 1.149
ENSG00000115677 E046 100.0533048 0.0001847659 2.693527e-02 1.525012e-01 2 241246752 241246883 132 - 2.026 1.958 -0.228
ENSG00000115677 E047 77.4800192 0.0001934112 4.323187e-02 2.027890e-01 2 241247056 241247142 87 - 1.918 1.847 -0.237
ENSG00000115677 E048 0.7178154 0.0134924180 2.187488e-01 5.054020e-01 2 241247143 241247417 275 - 0.302 0.113 -1.758
ENSG00000115677 E049 90.9831177 0.0001708197 4.368109e-01 7.132379e-01 2 241248003 241248116 114 - 1.968 1.944 -0.082
ENSG00000115677 E050 39.9922900 0.0005239059 1.129173e-01 3.535249e-01 2 241248244 241248248 5 - 1.638 1.561 -0.262
ENSG00000115677 E051 68.7044112 0.0024241535 9.436067e-01 9.844026e-01 2 241248249 241248328 80 - 1.837 1.840 0.011
ENSG00000115677 E052 35.8497674 0.0003842874 1.859766e-01 4.639015e-01 2 241248329 241248348 20 - 1.532 1.599 0.229
ENSG00000115677 E053 0.0000000       2 241249358 241249396 39 -      
ENSG00000115677 E054 80.2831338 0.0001890306 3.875433e-01 6.733455e-01 2 241249841 241249980 140 - 1.917 1.888 -0.098
ENSG00000115677 E055 1.1168130 0.0426268331 1.287920e-01 3.806592e-01 2 241249981 241250166 186 - 0.205 0.445 1.564
ENSG00000115677 E056 3.0974708 0.0056291610 6.150717e-03 5.751262e-02 2 241250167 241250996 830 - 0.417 0.782 1.652
ENSG00000115677 E057 26.2253561 0.0008975142 4.762482e-01 7.428077e-01 2 241252957 241252964 8 - 1.447 1.405 -0.144
ENSG00000115677 E058 40.7436877 0.0003432729 1.290851e-01 3.812478e-01 2 241252965 241252999 35 - 1.644 1.572 -0.247
ENSG00000115677 E059 44.2962040 0.0003018040 3.182047e-01 6.109652e-01 2 241253000 241253035 36 - 1.669 1.624 -0.154
ENSG00000115677 E060 59.5407763 0.0002564898 5.907565e-01 8.188681e-01 2 241253393 241253497 105 - 1.785 1.764 -0.070
ENSG00000115677 E061 46.4940954 0.0012744275 3.883315e-01 6.742023e-01 2 241255051 241255158 108 - 1.688 1.648 -0.135
ENSG00000115677 E062 3.5672412 0.0039681946 1.135487e-01 3.545908e-01 2 241255159 241255327 169 - 0.558 0.761 0.864
ENSG00000115677 E063 1.2089246 0.1143404642 5.613830e-01 8.017716e-01 2 241255328 241255373 46 - 0.382 0.277 -0.658
ENSG00000115677 E064 55.2981862 0.0002718629 4.729679e-03 4.761816e-02 2 241255374 241255496 123 - 1.791 1.673 -0.398
ENSG00000115677 E065 29.6326774 0.0119692933 8.089794e-02 2.922829e-01 2 241255497 241255511 15 - 1.529 1.405 -0.427
ENSG00000115677 E066 47.2430139 0.0006283946 3.705219e-02 1.853714e-01 2 241255512 241255580 69 - 1.715 1.621 -0.321
ENSG00000115677 E067 89.9601115 0.0044953274 1.673728e-02 1.128029e-01 2 241256184 241256382 199 - 1.994 1.891 -0.346
ENSG00000115677 E068 19.6961529 0.0008993035 2.741637e-02 1.541892e-01 2 241256383 241256393 11 - 1.368 1.217 -0.530
ENSG00000115677 E069 18.6019290 0.0008989677 1.954864e-02 1.251735e-01 2 241256394 241256399 6 - 1.349 1.184 -0.579
ENSG00000115677 E070 48.2565783 0.0035589523 1.337220e-01 3.885987e-01 2 241256600 241256713 114 - 1.717 1.642 -0.255
ENSG00000115677 E071 29.7209115 0.0005180702 4.814387e-01 7.464687e-01 2 241256714 241256764 51 - 1.465 1.504 0.135
ENSG00000115677 E072 26.8443550 0.0119320084 7.301631e-01 8.926025e-01 2 241256765 241256806 42 - 1.450 1.425 -0.086
ENSG00000115677 E073 20.5193223 0.0142863706 5.971260e-01 8.231201e-01 2 241262711 241262719 9 - 1.345 1.302 -0.150
ENSG00000115677 E074 22.7202793 0.0116339661 6.599116e-01 8.580098e-01 2 241262720 241262735 16 - 1.383 1.351 -0.112
ENSG00000115677 E075 27.6658420 0.0005883368 2.792720e-01 5.725351e-01 2 241262736 241262781 46 - 1.477 1.415 -0.214
ENSG00000115677 E076 36.3686110 0.0084006435 9.528514e-01 9.883484e-01 2 241262782 241262868 87 - 1.569 1.565 -0.013
ENSG00000115677 E077 16.6853686 0.0225050146 8.082423e-01 9.291769e-01 2 241262869 241262870 2 - 1.233 1.254 0.074
ENSG00000115677 E078 30.9555793 0.0004782170 3.761366e-01 6.633711e-01 2 241262871 241262915 45 - 1.519 1.471 -0.164
ENSG00000115677 E079 21.9405713 0.0005986956 2.217618e-01 5.089791e-01 2 241262916 241262916 1 - 1.387 1.308 -0.272
ENSG00000115677 E080 24.6095467 0.0005533988 2.006385e-01 4.827247e-01 2 241262917 241262923 7 - 1.434 1.357 -0.268
ENSG00000115677 E081 23.2839370 0.0005835926 2.698908e-01 5.635203e-01 2 241262924 241262926 3 - 1.408 1.339 -0.237
ENSG00000115677 E082 21.5878680 0.0006151404 2.952777e-01 5.885040e-01 2 241264448 241264448 1 - 1.376 1.308 -0.234
ENSG00000115677 E083 27.4248566 0.0004764352 3.982293e-01 6.823210e-01 2 241264449 241264474 26 - 1.468 1.420 -0.166
ENSG00000115677 E084 31.9258444 0.0004644420 4.387415e-01 7.147888e-01 2 241264475 241264520 46 - 1.529 1.488 -0.141
ENSG00000115677 E085 20.7697544 0.0017092079 6.432801e-01 8.486955e-01 2 241264521 241264541 21 - 1.345 1.315 -0.106
ENSG00000115677 E086 35.5060697 0.0003801214 8.850450e-02 3.086207e-01 2 241264542 241264605 64 - 1.592 1.504 -0.298
ENSG00000115677 E087 0.0000000       2 241266537 241266627 91 -      
ENSG00000115677 E088 27.3200260 0.0005576462 1.308498e-02 9.579547e-02 2 241266794 241266811 18 - 1.502 1.357 -0.503
ENSG00000115677 E089 21.8626015 0.0006144263 1.431318e-02 1.017413e-01 2 241266812 241266817 6 - 1.414 1.254 -0.557
ENSG00000115677 E090 23.7007251 0.0005679111 3.913359e-02 1.915621e-01 2 241266818 241266826 9 - 1.437 1.308 -0.447
ENSG00000115677 E091 32.6443434 0.0004729843 1.821680e-02 1.192071e-01 2 241266827 241266865 39 - 1.571 1.444 -0.436
ENSG00000115677 E092 28.3760046 0.0038406083 1.464899e-02 1.033864e-01 2 241266866 241266906 41 - 1.521 1.368 -0.529
ENSG00000115677 E093 0.1170040 0.0117207522 8.014825e-01   2 241267578 241267591 14 - 0.080 0.000 -13.397
ENSG00000115677 E094 0.1170040 0.0117207522 8.014825e-01   2 241267592 241267708 117 - 0.080 0.000 -13.397
ENSG00000115677 E095 16.5458470 0.0007820975 3.103946e-02 1.659808e-01 2 241268477 241268498 22 - 1.299 1.140 -0.564
ENSG00000115677 E096 12.9473294 0.0010257548 1.557658e-01 4.218450e-01 2 241268499 241268541 43 - 1.184 1.069 -0.416
ENSG00000115677 E097 1.3873277 0.0099723987 4.956447e-04 8.679254e-03 2 241268542 241268694 153 - 0.080 0.599 3.886
ENSG00000115677 E098 0.4896324 0.0158672191 6.995608e-01   2 241268829 241268953 125 - 0.147 0.203 0.564
ENSG00000115677 E099 0.2441403 0.0164635471 7.619517e-01   2 241268954 241268957 4 - 0.080 0.113 0.564
ENSG00000115677 E100 1.6892971 0.0189659402 3.722735e-01 6.601630e-01 2 241268958 241269105 148 - 0.479 0.341 -0.758
ENSG00000115677 E101 1.2089219 0.0549136979 5.235045e-01 7.767524e-01 2 241269106 241269172 67 - 0.382 0.277 -0.659
ENSG00000115677 E102 0.8341250 0.0125511249 1.381606e-01 3.955327e-01 2 241269173 241269200 28 - 0.344 0.113 -2.021
ENSG00000115677 E103 0.7164944 0.0144133853 2.190373e-01 5.057439e-01 2 241269201 241269205 5 - 0.302 0.113 -1.758
ENSG00000115677 E104 1.5699074 0.1314398541 5.457689e-01 7.916173e-01 2 241269206 241269273 68 - 0.449 0.340 -0.607
ENSG00000115677 E105 1.3601350 0.3660547707 3.246535e-01 6.170659e-01 2 241269274 241269295 22 - 0.257 0.489 1.369
ENSG00000115677 E106 3.4922557 0.0038986143 2.397583e-04 4.854026e-03 2 241269361 241269561 201 - 0.382 0.860 2.149
ENSG00000115677 E107 0.4828334 0.0339622703 5.447328e-01   2 241271917 241271971 55 - 0.205 0.113 -1.021
ENSG00000115677 E108 3.8506432 0.0090639147 7.610964e-02 2.819104e-01 2 241272761 241272886 126 - 0.766 0.529 -1.021
ENSG00000115677 E109 0.3804973 0.0158289401 4.744668e-02   2 241273036 241273117 82 - 0.000 0.277 14.861
ENSG00000115677 E110 0.0000000       2 241302640 241302724 85 -      
ENSG00000115677 E111 0.0000000       2 241315102 241315292 191 -      
ENSG00000115677 E112 0.6062868 0.0236666036 9.854953e-01 9.990203e-01 2 241315570 241315820 251 - 0.205 0.203 -0.021
ENSG00000115677 E113 1.2445836 0.0523363083 7.570937e-02 2.811380e-01 2 241316871 241317061 191 - 0.205 0.489 1.786

Help

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