ENSG00000124155

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

  • Note:

    • About the Coding Potential: Please check the spreadsheet in the “Results” tag to confirm the coding potential. The above figure only show the predicted coding potential. The “gene_biotype” in the result spreadsheet is from the database record. Therefore, if you find conflicts between “gene_biotype” and “codingPotential”, please trust the “gene_biotype”.

    • Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

    • For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000279035 ENSG00000124155 No_inf pgKDN_inf PIGT protein_coding protein_coding 98.9389 114.9619 87.5154 2.159752 2.717076 -0.3935075 3.975015 1.150304 5.306732 0.9466251 2.060611 2.19603683 0.04346667 0.010425 0.061850 0.051425 0.4334015 0.0213126 FALSE  
ENST00000279036 ENSG00000124155 No_inf pgKDN_inf PIGT protein_coding protein_coding 98.9389 114.9619 87.5154 2.159752 2.717076 -0.3935075 4.842347 10.651942 1.132794 1.2975456 1.132794 -3.22183364 0.04461667 0.092350 0.013175 -0.079175 0.0213126 0.0213126 FALSE  
ENST00000545755 ENSG00000124155 No_inf pgKDN_inf PIGT protein_coding protein_coding 98.9389 114.9619 87.5154 2.159752 2.717076 -0.3935075 24.867316 29.310879 21.366765 7.1488325 7.311132 -0.45588481 0.24596667 0.252575 0.238975 -0.013600 0.9680701 0.0213126 FALSE  
ENST00000638489 ENSG00000124155 No_inf pgKDN_inf PIGT protein_coding protein_coding 98.9389 114.9619 87.5154 2.159752 2.717076 -0.3935075 16.705764 15.460809 17.348709 1.2672806 2.324291 0.16611094 0.17201667 0.135250 0.197325 0.062075 0.5316531 0.0213126 FALSE  
ENST00000639783 ENSG00000124155 No_inf pgKDN_inf PIGT protein_coding nonsense_mediated_decay 98.9389 114.9619 87.5154 2.159752 2.717076 -0.3935075 24.974022 24.814410 26.113787 1.8705253 2.806837 0.07360457 0.25785833 0.215650 0.298625 0.082975 0.4821260 0.0213126 FALSE  
ENST00000640175 ENSG00000124155 No_inf pgKDN_inf PIGT protein_coding nonsense_mediated_decay 98.9389 114.9619 87.5154 2.159752 2.717076 -0.3935075 12.252264 18.435484 6.458510 6.5182602 6.458510 -1.51176226 0.12343333 0.163025 0.079150 -0.083875 0.4091920 0.0213126 FALSE  
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

Help

Please Click HERE to learn more details about the results of IsoformSwitchAnalyzeR.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand pgKDN.inf No.inf log2fold_No.inf_pgKDN.inf
ENSG00000124155 E001 0.0000000       20 45416084 45416096 13 +      
ENSG00000124155 E002 0.0000000       20 45416097 45416106 10 +      
ENSG00000124155 E003 0.0000000       20 45416107 45416111 5 +      
ENSG00000124155 E004 0.0000000       20 45416112 45416121 10 +      
ENSG00000124155 E005 0.0000000       20 45416122 45416122 1 +      
ENSG00000124155 E006 0.1176306 0.0117118234 0.372328222   20 45416123 45416126 4 + 0.111 0.000 -11.693
ENSG00000124155 E007 0.3549719 0.0157190094 0.050692872   20 45416127 45416131 5 + 0.273 0.000 -15.604
ENSG00000124155 E008 0.3549719 0.0157190094 0.050692872   20 45416132 45416132 1 + 0.273 0.000 -15.604
ENSG00000124155 E009 0.3549719 0.0157190094 0.050692872   20 45416133 45416136 4 + 0.273 0.000 -15.604
ENSG00000124155 E010 1.2075711 0.0099109434 0.068484385 0.26413307 20 45416137 45416140 4 + 0.484 0.208 -1.733
ENSG00000124155 E011 1.2075711 0.0099109434 0.068484385 0.26413307 20 45416141 45416141 1 + 0.484 0.208 -1.733
ENSG00000124155 E012 1.3348335 0.0094502088 0.138064132 0.39539293 20 45416142 45416142 1 + 0.484 0.260 -1.318
ENSG00000124155 E013 1.3348335 0.0094502088 0.138064132 0.39539293 20 45416143 45416143 1 + 0.484 0.260 -1.318
ENSG00000124155 E014 1.3348335 0.0094502088 0.138064132 0.39539293 20 45416144 45416144 1 + 0.484 0.260 -1.318
ENSG00000124155 E015 2.3142221 0.0059981460 0.147269092 0.40851778 20 45416145 45416149 5 + 0.625 0.422 -0.970
ENSG00000124155 E016 3.0252384 0.0049068123 0.007570463 0.06657780 20 45416150 45416150 1 + 0.776 0.422 -1.598
ENSG00000124155 E017 3.1438765 0.0049772189 0.004387881 0.04524971 20 45416151 45416151 1 + 0.796 0.422 -1.680
ENSG00000124155 E018 3.5145238 0.0041064621 0.009088004 0.07552562 20 45416152 45416153 2 + 0.816 0.484 -1.436
ENSG00000124155 E019 3.7681672 0.0039743250 0.026054591 0.14927424 20 45416154 45416156 3 + 0.816 0.539 -1.173
ENSG00000124155 E020 7.9727881 0.0017743703 0.291377494 0.58492402 20 45416157 45416174 18 + 1.002 0.902 -0.377
ENSG00000124155 E021 30.3674898 0.0005345655 0.007511891 0.06624368 20 45416175 45416312 138 + 1.567 1.425 -0.487
ENSG00000124155 E022 21.7548226 0.0006368639 0.277885305 0.57117749 20 45416313 45416343 31 + 1.387 1.320 -0.232
ENSG00000124155 E023 0.0000000       20 45416475 45416516 42 +      
ENSG00000124155 E024 16.0773615 0.0009176782 0.156697675 0.42307431 20 45416517 45416518 2 + 1.281 1.180 -0.356
ENSG00000124155 E025 48.8799397 0.0003340080 0.496697035 0.75766773 20 45416519 45416654 136 + 1.705 1.677 -0.093
ENSG00000124155 E026 20.5188974 0.0006597027 0.256518268 0.54856087 20 45416655 45416664 10 + 1.366 1.294 -0.250
ENSG00000124155 E027 28.2031036 0.0004719248 0.709371559 0.88242373 20 45416665 45416694 30 + 1.467 1.448 -0.066
ENSG00000124155 E028 2.3850979 0.0059748083 0.018105756 0.11871090 20 45416695 45418240 1546 + 0.273 0.632 1.905
ENSG00000124155 E029 0.4904501 0.0158114509 0.722935526   20 45418241 45418381 141 + 0.200 0.149 -0.510
ENSG00000124155 E030 0.4896948 0.0158169709 0.722895953   20 45418382 45418526 145 + 0.200 0.149 -0.510
ENSG00000124155 E031 0.0000000       20 45418527 45418534 8 +      
ENSG00000124155 E032 0.0000000       20 45418535 45418535 1 +      
ENSG00000124155 E033 0.1271363 0.0123496184 0.773545842   20 45418536 45418561 26 + 0.000 0.081 12.521
ENSG00000124155 E034 0.2543986 0.0160306236 0.391634347   20 45418562 45418771 210 + 0.000 0.149 13.462
ENSG00000124155 E035 0.1272623 0.0123426760 0.773581390   20 45418772 45418851 80 + 0.000 0.081 12.521
ENSG00000124155 E036 54.2890559 0.0002729669 0.404710058 0.68741953 20 45418852 45418979 128 + 1.752 1.720 -0.109
ENSG00000124155 E037 0.0000000       20 45418980 45419142 163 +      
ENSG00000124155 E038 0.0000000       20 45419143 45419277 135 +      
ENSG00000124155 E039 0.2356421 0.0157093034 0.142047137   20 45419278 45419294 17 + 0.200 0.000 -15.055
ENSG00000124155 E040 52.5790944 0.0004056289 0.533726985 0.78411014 20 45419295 45419395 101 + 1.734 1.710 -0.081
ENSG00000124155 E041 0.3801504 0.0291216975 0.195453139   20 45419473 45419503 31 + 0.000 0.208 13.947
ENSG00000124155 E042 24.5621765 0.0007040781 0.484990099 0.74887937 20 45419504 45419507 4 + 1.371 1.415 0.154
ENSG00000124155 E043 51.0742038 0.0002910686 0.592475069 0.82016761 20 45419508 45419590 83 + 1.692 1.717 0.083
ENSG00000124155 E044 0.0000000       20 45419591 45419638 48 +      
ENSG00000124155 E045 0.0000000       20 45419906 45419941 36 +      
ENSG00000124155 E046 0.1176306 0.0117118234 0.372328222   20 45419942 45420135 194 + 0.111 0.000 -14.129
ENSG00000124155 E047 31.0859744 0.0085984804 0.862167176 0.95242621 20 45420136 45420152 17 + 1.489 1.502 0.046
ENSG00000124155 E048 59.8235321 0.0023680104 0.150483954 0.41307614 20 45420153 45420223 71 + 1.734 1.799 0.220
ENSG00000124155 E049 0.1271363 0.0123496184 0.773545842   20 45420312 45420331 20 + 0.000 0.081 12.521
ENSG00000124155 E050 68.3102587 0.0047488040 0.252741807 0.54411796 20 45420332 45420420 89 + 1.797 1.852 0.187
ENSG00000124155 E051 31.1045688 0.0004542020 0.257889748 0.55006825 20 45420421 45420429 9 + 1.532 1.473 -0.201
ENSG00000124155 E052 0.2537694 0.0160063335 0.391724274   20 45420508 45420527 20 + 0.000 0.149 13.462
ENSG00000124155 E053 60.2552478 0.0002702509 0.156234338 0.42250014 20 45420528 45420600 73 + 1.809 1.756 -0.179
ENSG00000124155 E054 68.0021074 0.0002694051 0.799343760 0.92470950 20 45420601 45420693 93 + 1.834 1.826 -0.025
ENSG00000124155 E055 2.2658618 0.0065548426 0.005281421 0.05162886 20 45420694 45421353 660 + 0.200 0.632 2.490
ENSG00000124155 E056 0.2539903 0.0160275078 0.391709789   20 45421354 45421382 29 + 0.000 0.149 13.462
ENSG00000124155 E057 43.8653890 0.0054685866 0.206984969 0.49059667 20 45421383 45421415 33 + 1.597 1.670 0.246
ENSG00000124155 E058 79.3388077 0.0004038989 0.399627227 0.68338134 20 45421416 45421533 118 + 1.876 1.907 0.105
ENSG00000124155 E059 53.0580886 0.0004360492 0.054754025 0.23306681 20 45421534 45421583 50 + 1.671 1.754 0.283
ENSG00000124155 E060 1.4985401 0.0183280689 0.253044909 0.54444984 20 45421584 45421664 81 + 0.273 0.454 1.075
ENSG00000124155 E061 8.9389404 0.0279798553 0.138207026 0.39557911 20 45421665 45423103 1439 + 0.871 1.051 0.674
ENSG00000124155 E062 1.8880379 0.2275042036 0.118484282 0.36356211 20 45423104 45423505 402 + 0.200 0.564 2.190
ENSG00000124155 E063 1.0082187 0.0944350812 0.104653270 0.33812792 20 45423506 45423591 86 + 0.111 0.387 2.297
ENSG00000124155 E064 1.1331526 0.0105822521 0.049349489 0.21906299 20 45423592 45423767 176 + 0.111 0.422 2.490
ENSG00000124155 E065 0.4992916 0.0289175103 0.523561742   20 45423768 45423813 46 + 0.111 0.208 1.075
ENSG00000124155 E066 3.4932565 0.0067370438 0.079069060 0.28835950 20 45423814 45424215 402 + 0.484 0.725 1.075
ENSG00000124155 E067 61.0447733 0.0002994488 0.133871981 0.38877081 20 45424216 45424269 54 + 1.745 1.806 0.205
ENSG00000124155 E068 89.9627905 0.0001891614 0.059179991 0.24417179 20 45424270 45424381 112 + 1.910 1.973 0.210
ENSG00000124155 E069 0.2459655 0.0163849555 0.780908158   20 45424382 45424460 79 + 0.111 0.081 -0.510
ENSG00000124155 E070 0.4822342 0.0152594222 0.176987572   20 45424461 45424495 35 + 0.273 0.081 -2.095
ENSG00000124155 E071 64.4005481 0.0002387235 0.604446972 0.82743834 20 45424496 45424579 84 + 1.793 1.814 0.072
ENSG00000124155 E072 2.7648430 0.0066309910 0.005492034 0.05297932 20 45424580 45425123 544 + 0.273 0.690 2.153
ENSG00000124155 E073 181.8263802 0.0011102291 0.570027396 0.80681951 20 45425574 45425915 342 + 2.260 2.247 -0.041
ENSG00000124155 E074 100.2671843 0.0001611987 0.132867201 0.38704252 20 45425916 45427421 1506 + 2.021 1.978 -0.144
ENSG00000124155 E075 0.2542726 0.2891356154 0.463082306   20 45427422 45427426 5 + 0.000 0.149 12.816
ENSG00000124155 E076 0.3719033 0.2323042349 0.871481804   20 45427427 45427545 119 + 0.111 0.149 0.490
ENSG00000124155 E077 0.2537694 0.0160063335 0.391724274   20 45429445 45429480 36 + 0.000 0.149 13.462
ENSG00000124155 E078 0.3714000 0.0165826826 0.831081148   20 45429481 45429482 2 + 0.111 0.149 0.490
ENSG00000124155 E079 0.8699363 0.0276856634 0.497290941 0.75796558 20 45429483 45429670 188 + 0.200 0.307 0.812
ENSG00000124155 E080 0.8511834 0.0146402306 0.400398162 0.68382782 20 45429671 45430149 479 + 0.336 0.208 -0.925
ENSG00000124155 E081 0.2530140 0.2374180681 0.448406565   20 45431172 45431264 93 + 0.000 0.149 12.878
ENSG00000124155 E082 0.0000000       20 45431265 45431335 71 +      
ENSG00000124155 E083 0.1265070 0.0123005608 0.773587948   20 45441911 45443250 1340 + 0.000 0.081 12.521
ENSG00000124155 E084 0.7624406 0.0269457160 0.029607378 0.16174766 20 45445431 45446150 720 + 0.000 0.348 14.882
ENSG00000124155 E085 0.4791531 0.0348492808 0.180513860   20 45446151 45446642 492 + 0.273 0.081 -2.095
ENSG00000124155 E086 0.3716522 0.1549932338 0.856089217   20 45446643 45447454 812 + 0.111 0.149 0.489
ENSG00000124155 E087 0.0000000       20 45447455 45447596 142 +      
ENSG00000124155 E088 0.0000000       20 45447597 45447634 38 +      
ENSG00000124155 E089 0.0000000       20 45447635 45447816 182 +      
ENSG00000124155 E090 0.0000000       20 45447817 45448243 427 +      
ENSG00000124155 E091 0.1170040 0.0117696562 0.372136492   20 45448244 45451934 3691 + 0.111 0.000 -14.129
ENSG00000124155 E092 0.0000000       20 45451935 45451997 63 +      
ENSG00000124155 E093 0.0000000       20 45451998 45452177 180 +      
ENSG00000124155 E094 0.1265070 0.0123005608 0.773587948   20 45456609 45456934 326 + 0.000 0.081 12.521

Help

Please Click HERE to learn more details about the results from DEXseq.