ENSG00000126777

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

  • Note:

    • About the Coding Potential: Please check the spreadsheet in the “Results” tag to confirm the coding potential. The above figure only show the predicted coding potential. The “gene_biotype” in the result spreadsheet is from the database record. Therefore, if you find conflicts between “gene_biotype” and “codingPotential”, please trust the “gene_biotype”.

    • Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

    • For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000395314 ENSG00000126777 No_inf pgKDN_inf KTN1 protein_coding protein_coding 73.67187 64.3088 85.5076 6.465938 3.965709 0.4109809 11.033641 1.525592 21.832020 1.525592 3.131617 3.8302394 0.14222500 0.027250 0.259775 0.232525 0.003608431 0.003608431 FALSE TRUE
ENST00000438792 ENSG00000126777 No_inf pgKDN_inf KTN1 protein_coding protein_coding 73.67187 64.3088 85.5076 6.465938 3.965709 0.4109809 6.151538 1.430217 8.067260 1.430217 8.067260 2.4875795 0.08575833 0.021450 0.108825 0.087375 1.000000000 0.003608431 FALSE TRUE
ENST00000553624 ENSG00000126777 No_inf pgKDN_inf KTN1 protein_coding protein_coding 73.67187 64.3088 85.5076 6.465938 3.965709 0.4109809 5.739998 5.488547 7.905741 5.488547 2.801530 0.5256740 0.06845833 0.067275 0.088200 0.020925 0.356104350 0.003608431 FALSE FALSE
ENST00000554507 ENSG00000126777 No_inf pgKDN_inf KTN1 protein_coding protein_coding 73.67187 64.3088 85.5076 6.465938 3.965709 0.4109809 4.178497 4.634947 4.992365 1.751372 1.933883 0.1069481 0.05794167 0.078050 0.055525 -0.022525 0.969568070 0.003608431 FALSE TRUE
MSTRG.8578.15 ENSG00000126777 No_inf pgKDN_inf KTN1 protein_coding   73.67187 64.3088 85.5076 6.465938 3.965709 0.4109809 5.927636 0.000000 17.782907 0.000000 6.790316 10.7970865 0.06673333 0.000000 0.200200 0.200200 0.003748536 0.003608431 FALSE TRUE
MSTRG.8578.2 ENSG00000126777 No_inf pgKDN_inf KTN1 protein_coding   73.67187 64.3088 85.5076 6.465938 3.965709 0.4109809 15.808185 17.858713 7.662695 2.233319 4.424069 -1.2196304 0.22579167 0.282650 0.085850 -0.196800 0.283364909 0.003608431 FALSE TRUE
MSTRG.8578.5 ENSG00000126777 No_inf pgKDN_inf KTN1 protein_coding   73.67187 64.3088 85.5076 6.465938 3.965709 0.4109809 3.520932 2.378858 4.200168 2.378858 3.480516 0.8175567 0.05215000 0.044925 0.055550 0.010625 0.835426503 0.003608431 FALSE TRUE
MSTRG.8578.6 ENSG00000126777 No_inf pgKDN_inf KTN1 protein_coding   73.67187 64.3088 85.5076 6.465938 3.965709 0.4109809 6.848230 9.473129 2.605038 5.609919 2.605038 -1.8585312 0.09992500 0.152575 0.028250 -0.124325 0.835468228 0.003608431 FALSE TRUE
MSTRG.8578.7 ENSG00000126777 No_inf pgKDN_inf KTN1 protein_coding   73.67187 64.3088 85.5076 6.465938 3.965709 0.4109809 5.605152 7.854700 2.297108 4.534976 2.297108 -1.7693061 0.08225000 0.129050 0.025750 -0.103300 0.835767094 0.003608431 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

Help

Please Click HERE to learn more details about the results of IsoformSwitchAnalyzeR.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand pgKDN.inf No.inf log2fold_No.inf_pgKDN.inf
ENSG00000126777 E001 0.0000000       14 55559072 55559150 79 +      
ENSG00000126777 E002 0.0000000       14 55580206 55580206 1 +      
ENSG00000126777 E003 0.0000000       14 55580207 55580209 3 +      
ENSG00000126777 E004 0.1265070 0.0123061212 4.110544e-01   14 55580210 55580221 12 + 0.000 0.107 9.829
ENSG00000126777 E005 0.6174916 0.0211130951 4.627084e-01 0.7329898734 14 55580222 55580224 3 + 0.155 0.265 0.969
ENSG00000126777 E006 0.8632661 0.0740021649 4.939530e-01 0.7557112298 14 55580225 55580227 3 + 0.216 0.326 0.799
ENSG00000126777 E007 1.5783748 0.0094303622 7.213949e-01 0.8878439430 14 55580228 55580236 9 + 0.434 0.380 -0.294
ENSG00000126777 E008 2.4394722 0.0058135332 8.873182e-01 0.9622978763 14 55580237 55580253 17 + 0.526 0.546 0.095
ENSG00000126777 E009 12.1233757 0.0057002070 2.554683e-01 0.5474365234 14 55580254 55580314 61 + 1.069 1.167 0.355
ENSG00000126777 E010 11.3877502 0.0162501833 3.296720e-01 0.6221318497 14 55580315 55580321 7 + 1.044 1.142 0.354
ENSG00000126777 E011 10.7807691 0.0245128389 3.361997e-01 0.6281209641 14 55580322 55580323 2 + 1.018 1.124 0.385
ENSG00000126777 E012 13.3825654 0.0261439697 1.283953e-01 0.3799087979 14 55580324 55580354 31 + 1.076 1.236 0.570
ENSG00000126777 E013 0.2363338 0.0157021144 3.473348e-01   14 55589006 55589031 26 + 0.155 0.000 -13.645
ENSG00000126777 E014 0.2533610 0.0160255696 1.642848e-01   14 55598436 55598493 58 + 0.000 0.193 13.609
ENSG00000126777 E015 3.6904490 0.0344160924 1.937738e-01 0.4736261852 14 55601757 55601791 35 + 0.578 0.760 0.772
ENSG00000126777 E016 7.3603455 0.0138157379 1.586866e-01 0.4257538864 14 55601792 55601880 89 + 0.845 0.998 0.577
ENSG00000126777 E017 0.1187032 0.0118764822 7.003987e-01   14 55607346 55607460 115 + 0.084 0.000 -12.680
ENSG00000126777 E018 0.2352613 0.2778372535 4.162858e-01   14 55611977 55612018 42 + 0.155 0.000 -12.906
ENSG00000126777 E019 150.2446896 0.0001147828 2.074301e-01 0.4910179163 14 55612019 55612571 553 + 2.163 2.194 0.105
ENSG00000126777 E020 65.4029702 0.0002364542 5.376540e-01 0.7866922521 14 55616517 55616654 138 + 1.830 1.808 -0.076
ENSG00000126777 E021 77.8292061 0.0001984964 6.110460e-01 0.8308704974 14 55617964 55618134 171 + 1.902 1.885 -0.057
ENSG00000126777 E022 53.6563181 0.0002634085 7.007863e-01 0.8781646871 14 55619182 55619312 131 + 1.728 1.745 0.055
ENSG00000126777 E023 56.0509810 0.0002775838 1.083613e-01 0.3453296300 14 55627912 55628028 117 + 1.782 1.717 -0.219
ENSG00000126777 E024 65.5829635 0.0036497190 5.440371e-02 0.2322813339 14 55629957 55630097 141 + 1.858 1.772 -0.290
ENSG00000126777 E025 50.6372317 0.0061846654 6.193429e-01 0.8353655607 14 55633235 55633341 107 + 1.723 1.696 -0.091
ENSG00000126777 E026 20.1963870 0.0011367074 5.320104e-01 0.7824348483 14 55634526 55634529 4 + 1.342 1.301 -0.143
ENSG00000126777 E027 59.9943168 0.0002566510 4.145783e-01 0.6947937107 14 55634530 55634658 129 + 1.797 1.766 -0.106
ENSG00000126777 E028 47.1336733 0.0013537155 2.256221e-01 0.5134039432 14 55636449 55636536 88 + 1.654 1.710 0.190
ENSG00000126777 E029 72.4241412 0.0002121032 6.697121e-01 0.8627586115 14 55637198 55637364 167 + 1.857 1.872 0.053
ENSG00000126777 E030 42.9306113 0.0003457738 7.322912e-01 0.8935926996 14 55637779 55637847 69 + 1.633 1.650 0.055
ENSG00000126777 E031 26.9050361 0.0005016471 6.932224e-01 0.8746998325 14 55639185 55639222 38 + 1.454 1.431 -0.076
ENSG00000126777 E032 42.0594793 0.0003795532 5.469189e-03 0.0528318191 14 55639913 55640003 91 + 1.686 1.556 -0.444
ENSG00000126777 E033 40.3827182 0.0003946724 1.269862e-02 0.0938202034 14 55640374 55640442 69 + 1.665 1.546 -0.406
ENSG00000126777 E034 31.2861057 0.0004401408 2.380044e-02 0.1412159225 14 55640933 55640970 38 + 1.558 1.436 -0.418
ENSG00000126777 E035 42.5088968 0.0003333367 6.825589e-02 0.2637043744 14 55641127 55641208 82 + 1.673 1.588 -0.287
ENSG00000126777 E036 35.6853808 0.0037647282 8.153380e-01 0.9324717970 14 55641692 55641748 57 + 1.568 1.556 -0.042
ENSG00000126777 E037 22.0405819 0.0006799111 7.032055e-01 0.8792148316 14 55641749 55641760 12 + 1.371 1.347 -0.082
ENSG00000126777 E038 0.0000000       14 55644275 55644285 11 +      
ENSG00000126777 E039 0.0000000       14 55644286 55644443 158 +      
ENSG00000126777 E040 29.4332962 0.0004981290 3.635759e-01 0.6524189683 14 55646973 55647007 35 + 1.503 1.453 -0.171
ENSG00000126777 E041 38.9358406 0.0006654209 3.788951e-01 0.6657248600 14 55648025 55648088 64 + 1.618 1.576 -0.144
ENSG00000126777 E042 31.4724343 0.0004620966 7.083860e-01 0.8817874977 14 55648089 55648115 27 + 1.500 1.521 0.070
ENSG00000126777 E043 36.4991251 0.0017888814 5.684982e-01 0.8059437229 14 55648802 55648870 69 + 1.558 1.588 0.104
ENSG00000126777 E044 22.6103847 0.0007116888 3.231448e-01 0.6158516577 14 55649776 55649813 38 + 1.398 1.336 -0.213
ENSG00000126777 E045 42.7529928 0.0008594646 8.873950e-01 0.9623348157 14 55650328 55650418 91 + 1.642 1.636 -0.021
ENSG00000126777 E046 41.5527907 0.0029121504 9.190357e-01 0.9745682251 14 55650569 55650637 69 + 1.625 1.630 0.019
ENSG00000126777 E047 0.7427386 0.0442656165 2.659301e-01 0.5593865898 14 55651287 55651375 89 + 0.155 0.326 1.385
ENSG00000126777 E048 30.4625245 0.0020134918 9.493574e-01 0.9867725613 14 55651890 55651927 38 + 1.497 1.494 -0.010
ENSG00000126777 E049 49.4083407 0.0016368124 6.260039e-01 0.8392175113 14 55652850 55652940 91 + 1.690 1.713 0.077
ENSG00000126777 E050 40.8151919 0.0003407756 8.769014e-01 0.9582424961 14 55653017 55653085 69 + 1.622 1.616 -0.023
ENSG00000126777 E051 25.3787493 0.0179493903 3.842109e-01 0.6703338369 14 55653559 55653596 38 + 1.450 1.379 -0.246
ENSG00000126777 E052 36.4815079 0.0004233963 3.411038e-01 0.6326808894 14 55656042 55656099 58 + 1.593 1.546 -0.161
ENSG00000126777 E053 26.1156954 0.0008357899 2.049884e-01 0.4881382189 14 55656100 55656101 2 + 1.463 1.389 -0.257
ENSG00000126777 E054 44.0113974 0.0087455630 3.401634e-01 0.6318869960 14 55656102 55656132 31 + 1.677 1.619 -0.197
ENSG00000126777 E055 0.0000000       14 55656133 55656347 215 +      
ENSG00000126777 E056 61.5713733 0.0037422450 3.475841e-01 0.6382158922 14 55658546 55658614 69 + 1.813 1.770 -0.146
ENSG00000126777 E057 38.8001013 0.0003581264 2.866062e-01 0.5801396040 14 55659666 55659703 38 + 1.620 1.569 -0.174
ENSG00000126777 E058 0.1170040 0.0117866053 7.003540e-01   14 55661249 55661273 25 + 0.084 0.000 -12.681
ENSG00000126777 E059 0.2438580 0.0165653836 8.368919e-01   14 55661274 55661379 106 + 0.084 0.107 0.385
ENSG00000126777 E060 0.0000000       14 55661380 55661521 142 +      
ENSG00000126777 E061 62.5183525 0.0004215071 2.134135e-01 0.4986598401 14 55661522 55661612 91 + 1.822 1.774 -0.161
ENSG00000126777 E062 0.2537079 0.2996047158 2.235409e-01   14 55661613 55661857 245 + 0.000 0.193 12.658
ENSG00000126777 E063 0.3726934 0.0167980755 4.321307e-01   14 55662905 55663196 292 + 0.084 0.193 1.384
ENSG00000126777 E064 0.7438101 0.0138499102 2.563942e-01 0.5484833563 14 55663343 55663954 612 + 0.155 0.326 1.385
ENSG00000126777 E065 35.5205240 0.0039489161 4.928851e-01 0.7549919428 14 55663955 55664041 87 + 1.542 1.582 0.136
ENSG00000126777 E066 65.3135806 0.0004324026 8.184805e-01 0.9339397475 14 55667241 55667330 90 + 1.823 1.815 -0.027
ENSG00000126777 E067 2.5955291 0.0249774925 1.111235e-01 0.3499756775 14 55667651 55668803 1153 + 0.434 0.666 1.085
ENSG00000126777 E068 71.8965802 0.0021971767 4.122890e-01 0.6936353441 14 55670729 55670809 81 + 1.845 1.879 0.114
ENSG00000126777 E069 0.2458395 0.0167435979 8.366728e-01   14 55671315 55671565 251 + 0.084 0.107 0.384
ENSG00000126777 E070 76.7747296 0.0002352141 4.203864e-02 0.1995170950 14 55671566 55671655 90 + 1.855 1.926 0.237
ENSG00000126777 E071 1.1151190 0.0108462893 1.652767e-01 0.4349158652 14 55671656 55671784 129 + 0.216 0.428 1.384
ENSG00000126777 E072 69.3141402 0.0003218181 1.217172e-01 0.3692593659 14 55671785 55671861 77 + 1.870 1.813 -0.190
ENSG00000126777 E073 43.6077499 0.0003943781 7.426390e-02 0.2777958860 14 55671862 55671877 16 + 1.682 1.601 -0.278
ENSG00000126777 E074 2.7697207 0.0446329489 1.478293e-04 0.0032676328 14 55671878 55672629 752 + 0.216 0.800 3.047
ENSG00000126777 E075 68.0288745 0.0014918581 8.821094e-01 0.9604217962 14 55672630 55672701 72 + 1.834 1.840 0.021
ENSG00000126777 E076 0.1268540 0.0123948361 4.109700e-01   14 55672702 55672928 227 + 0.000 0.107 12.658
ENSG00000126777 E077 32.4686649 0.0006973625 5.808899e-01 0.8132308330 14 55672929 55672929 1 + 1.509 1.539 0.102
ENSG00000126777 E078 68.2129699 0.0002310550 7.934702e-01 0.9212343965 14 55672930 55673012 83 + 1.842 1.833 -0.031
ENSG00000126777 E079 0.3809057 0.0158350440 6.141834e-02   14 55673013 55673171 159 + 0.000 0.265 14.176
ENSG00000126777 E080 23.0623226 0.0005842021 6.669589e-01 0.8614753005 14 55673172 55673255 84 + 1.367 1.394 0.093
ENSG00000126777 E081 6.5884376 0.0194711392 2.129491e-04 0.0044017100 14 55673256 55675049 1794 + 0.625 1.065 1.725
ENSG00000126777 E082 4.4660116 0.0032966686 5.581251e-03 0.0536671738 14 55675050 55675834 785 + 0.553 0.887 1.384
ENSG00000126777 E083 69.4352669 0.0005295280 8.426331e-01 0.9436776560 14 55675835 55675918 84 + 1.849 1.842 -0.023
ENSG00000126777 E084 54.6206708 0.0012579445 6.807713e-01 0.8681671485 14 55678352 55678444 93 + 1.735 1.753 0.061
ENSG00000126777 E085 0.7432731 0.0138729853 2.562122e-01 0.5482761836 14 55678445 55679564 1120 + 0.155 0.326 1.384
ENSG00000126777 E086 52.8896693 0.0002878668 2.459210e-01 0.5365929874 14 55679565 55679662 98 + 1.707 1.755 0.164
ENSG00000126777 E087 33.4186272 0.0020680320 9.633549e-02 0.3232399193 14 55679663 55679685 23 + 1.491 1.582 0.310
ENSG00000126777 E088 1.5155361 0.0087938836 4.547745e-04 0.0081164160 14 55679686 55680664 979 + 0.084 0.610 3.844
ENSG00000126777 E089 0.1187032 0.0118764822 7.003987e-01   14 55680665 55680685 21 + 0.084 0.000 -12.680
ENSG00000126777 E090 1.4945197 0.1217597961 6.306620e-02 0.2526301435 14 55680686 55680741 56 + 0.216 0.546 1.970
ENSG00000126777 E091 5.0129826 0.0028575151 4.886256e-07 0.0000242666 14 55680742 55683723 2982 + 0.398 1.010 2.622
ENSG00000126777 E092 134.2008183 0.0001313422 7.812530e-04 0.0123929707 14 55684099 55684583 485 + 2.087 2.175 0.292
ENSG00000126777 E093 0.0000000       14 55701344 55701526 183 +      

Help

Please Click HERE to learn more details about the results from DEXseq.