ENSG00000135905

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

  • Note:

    • About the Coding Potential: Please check the spreadsheet in the “Results” tag to confirm the coding potential. The above figure only show the predicted coding potential. The “gene_biotype” in the result spreadsheet is from the database record. Therefore, if you find conflicts between “gene_biotype” and “codingPotential”, please trust the “gene_biotype”.

    • Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

    • For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000409592 ENSG00000135905 No_inf pgKDN_inf DOCK10 protein_coding protein_coding 237.3102 258.2336 234.2136 15.57325 8.442999 -0.1408465 48.78364 40.66758 61.884351 0.4273648 2.1862933 0.60557399 0.2083500 0.159100 0.265125 0.106025 0.005340109 0.003689513 FALSE TRUE
ENST00000492251 ENSG00000135905 No_inf pgKDN_inf DOCK10 protein_coding retained_intron 237.3102 258.2336 234.2136 15.57325 8.442999 -0.1408465 19.92954 22.37114 4.457718 13.6904085 4.4577177 -2.32467330 0.0791250 0.078475 0.017325 -0.061150 0.846296217 0.003689513 FALSE FALSE
ENST00000698072 ENSG00000135905 No_inf pgKDN_inf DOCK10 protein_coding protein_coding 237.3102 258.2336 234.2136 15.57325 8.442999 -0.1408465 74.55536 85.67894 75.201460 3.9726245 2.9850644 -0.18815657 0.3137750 0.332850 0.321000 -0.011850 0.896984986 0.003689513 FALSE TRUE
MSTRG.17701.2 ENSG00000135905 No_inf pgKDN_inf DOCK10 protein_coding   237.3102 258.2336 234.2136 15.57325 8.442999 -0.1408465 53.91863 55.73496 59.411144 1.5569563 0.8991827 0.09213513 0.2295667 0.218925 0.254400 0.035475 0.719957261 0.003689513 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

Help

Please Click HERE to learn more details about the results of IsoformSwitchAnalyzeR.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand pgKDN.inf No.inf log2fold_No.inf_pgKDN.inf
ENSG00000135905 E001 0.2457744 1.657764e-02 9.747309e-01   2 224765085 224765089 5 - 0.097 0.093 -0.058
ENSG00000135905 E002 5.7261166 5.682544e-02 3.873937e-01 6.733127e-01 2 224765090 224765103 14 - 0.889 0.763 -0.492
ENSG00000135905 E003 13.2287894 2.718248e-03 8.385705e-01 9.421068e-01 2 224765104 224765133 30 - 1.161 1.145 -0.058
ENSG00000135905 E004 33.9232270 4.350464e-04 7.840732e-01 9.168342e-01 2 224765134 224765177 44 - 1.550 1.536 -0.048
ENSG00000135905 E005 875.5694134 4.036932e-05 4.839989e-06 1.833146e-04 2 224765178 224765837 660 - 2.917 2.963 0.151
ENSG00000135905 E006 102.4218716 1.536704e-04 5.238982e-53 1.046516e-49 2 224765838 224767485 1648 - 1.679 2.184 1.701
ENSG00000135905 E007 82.9283707 1.785608e-04 6.008094e-44 6.894479e-41 2 224767486 224768871 1386 - 1.585 2.094 1.719
ENSG00000135905 E008 13.7219117 9.746799e-04 2.004982e-07 1.094501e-05 2 224768872 224768947 76 - 0.889 1.320 1.562
ENSG00000135905 E009 75.0013387 1.987479e-04 2.441867e-35 1.854925e-32 2 224768948 224770210 1263 - 1.571 2.043 1.595
ENSG00000135905 E010 227.3290908 9.088304e-05 1.993145e-01 4.809336e-01 2 224770211 224770349 139 - 2.344 2.370 0.087
ENSG00000135905 E011 195.1077719 9.570417e-05 1.491766e-01 4.114276e-01 2 224770545 224770645 101 - 2.275 2.306 0.105
ENSG00000135905 E012 194.6537488 3.510618e-04 4.805695e-03 4.817191e-02 2 224773157 224773240 84 - 2.255 2.320 0.216
ENSG00000135905 E013 228.6171438 2.802561e-03 1.860256e-02 1.209390e-01 2 224773241 224773343 103 - 2.322 2.392 0.235
ENSG00000135905 E014 112.8941996 3.038765e-03 1.088090e-01 3.462858e-01 2 224773344 224773347 4 - 2.024 2.083 0.197
ENSG00000135905 E015 0.8715767 1.312274e-02 2.767008e-01 5.701383e-01 2 224774901 224774904 4 - 0.176 0.342 1.264
ENSG00000135905 E016 333.9918214 9.339291e-05 5.946766e-02 2.446475e-01 2 224774905 224775115 211 - 2.507 2.539 0.105
ENSG00000135905 E017 222.8880186 1.846925e-04 5.966102e-01 8.227231e-01 2 224778138 224778284 147 - 2.343 2.355 0.037
ENSG00000135905 E018 6.6689681 2.192138e-03 1.414763e-01 4.001039e-01 2 224784108 224784736 629 - 0.796 0.950 0.594
ENSG00000135905 E019 1.2248843 1.109772e-02 9.490269e-01 9.867620e-01 2 224784737 224784742 6 - 0.352 0.342 -0.058
ENSG00000135905 E020 166.3840047 1.041199e-04 2.086236e-01 4.926841e-01 2 224787022 224787135 114 - 2.207 2.237 0.099
ENSG00000135905 E021 180.7118899 1.234709e-03 9.536193e-01 9.885787e-01 2 224787275 224787397 123 - 2.260 2.258 -0.005
ENSG00000135905 E022 159.0279066 1.137306e-04 3.875381e-01 6.733455e-01 2 224789064 224789170 107 - 2.214 2.194 -0.069
ENSG00000135905 E023 136.0004952 1.240985e-04 8.459308e-01 9.452521e-01 2 224792974 224793072 99 - 2.139 2.134 -0.017
ENSG00000135905 E024 103.8463736 1.441798e-04 7.897616e-01 9.194020e-01 2 224793400 224793457 58 - 2.016 2.024 0.027
ENSG00000135905 E025 0.3812526 1.585533e-02 1.110377e-01   2 224793458 224793459 2 - 0.000 0.235 13.128
ENSG00000135905 E026 224.7592515 9.987230e-05 4.523321e-02 2.079138e-01 2 224794879 224795089 211 - 2.374 2.333 -0.135
ENSG00000135905 E027 56.0503394 2.466554e-03 4.226022e-01 7.019163e-01 2 224795090 224795094 5 - 1.774 1.738 -0.121
ENSG00000135905 E028 0.5079806 4.886964e-02 5.363891e-02 2.305699e-01 2 224795095 224795126 32 - 0.000 0.292 13.129
ENSG00000135905 E029 132.6826275 5.202848e-04 7.507561e-01 9.016993e-01 2 224796316 224796426 111 - 2.130 2.121 -0.029
ENSG00000135905 E030 158.9825675 2.725620e-04 9.416864e-01 9.835583e-01 2 224796964 224797146 183 - 2.202 2.204 0.006
ENSG00000135905 E031 119.7448585 1.369703e-04 4.123480e-01 6.936353e-01 2 224797832 224797969 138 - 2.093 2.070 -0.076
ENSG00000135905 E032 43.7809590 3.191810e-04 3.141147e-01 6.072209e-01 2 224800151 224800161 11 - 1.674 1.628 -0.155
ENSG00000135905 E033 96.3662196 1.853611e-03 1.245366e-01 3.740676e-01 2 224800162 224800263 102 - 2.016 1.961 -0.183
ENSG00000135905 E034 107.5606796 5.736270e-03 3.465993e-01 6.372635e-01 2 224801916 224802040 125 - 2.056 2.016 -0.134
ENSG00000135905 E035 82.8446782 1.321793e-02 9.537304e-01 9.885891e-01 2 224804112 224804213 102 - 1.921 1.924 0.010
ENSG00000135905 E036 55.9950335 9.454597e-03 3.527112e-01 6.427633e-01 2 224804794 224804841 48 - 1.781 1.731 -0.172
ENSG00000135905 E037 58.2016282 4.958701e-04 1.322302e-01 3.859564e-01 2 224805058 224805124 67 - 1.802 1.742 -0.204
ENSG00000135905 E038 91.8101414 9.749031e-04 8.950694e-01 9.652908e-01 2 224805206 224805320 115 - 1.965 1.969 0.015
ENSG00000135905 E039 95.5541448 1.618576e-04 7.273298e-01 8.911360e-01 2 224805408 224805502 95 - 1.990 1.979 -0.036
ENSG00000135905 E040 34.7033918 4.986684e-04 1.647370e-01 4.341310e-01 2 224805503 224805514 12 - 1.588 1.517 -0.241
ENSG00000135905 E041 36.6847201 3.961897e-04 7.233689e-03 6.447559e-02 2 224805515 224805529 15 - 1.641 1.508 -0.454
ENSG00000135905 E042 95.4207339 1.867772e-03 3.275775e-02 1.716297e-01 2 224806126 224806237 112 - 2.022 1.946 -0.254
ENSG00000135905 E043 24.2240662 1.015070e-03 2.034258e-07 1.107121e-05 2 224807245 224807667 423 - 1.197 1.527 1.147
ENSG00000135905 E044 82.5554377 2.327679e-04 1.011259e-02 8.086146e-02 2 224807668 224807784 117 - 1.965 1.879 -0.289
ENSG00000135905 E045 104.0010900 1.486878e-04 2.402309e-03 2.923424e-02 2 224807911 224808086 176 - 2.066 1.976 -0.303
ENSG00000135905 E046 47.6165477 3.191758e-04 5.851581e-01 8.157446e-01 2 224814320 224814364 45 - 1.699 1.675 -0.080
ENSG00000135905 E047 97.6547873 1.598709e-04 3.224155e-01 6.153827e-01 2 224816617 224816713 97 - 2.009 1.979 -0.102
ENSG00000135905 E048 75.6579749 1.962579e-04 5.097282e-01 7.674956e-01 2 224819446 224819529 84 - 1.896 1.873 -0.077
ENSG00000135905 E049 90.3419929 1.419311e-03 7.729971e-04 1.230427e-02 2 224823501 224823647 147 - 2.019 1.900 -0.399
ENSG00000135905 E050 56.7511464 3.403898e-03 1.784703e-03 2.339154e-02 2 224830541 224830612 72 - 1.832 1.686 -0.495
ENSG00000135905 E051 34.6845568 2.972419e-03 4.410133e-03 4.541645e-02 2 224834150 224834169 20 - 1.628 1.470 -0.538
ENSG00000135905 E052 65.6164713 2.174599e-04 7.330812e-02 2.753151e-01 2 224834170 224834263 94 - 1.857 1.790 -0.225
ENSG00000135905 E053 1.4774265 2.797509e-02 6.228332e-01 8.375390e-01 2 224834554 224834621 68 - 0.352 0.428 0.427
ENSG00000135905 E054 1.0046963 8.816596e-02 4.428781e-02 2.058267e-01 2 224837311 224837356 46 - 0.097 0.428 2.749
ENSG00000135905 E055 0.2457744 1.657764e-02 9.747309e-01   2 224837729 224837761 33 - 0.097 0.093 -0.058
ENSG00000135905 E056 53.0826133 3.293513e-04 1.649046e-01 4.343942e-01 2 224837762 224837831 70 - 1.701 1.759 0.196
ENSG00000135905 E057 64.9480450 2.197983e-04 9.055356e-01 9.697621e-01 2 224839954 224840072 119 - 1.821 1.816 -0.015
ENSG00000135905 E058 1.3703652 9.358117e-03 1.466183e-01 4.076740e-01 2 224840073 224840205 133 - 0.243 0.465 1.357
ENSG00000135905 E059 58.2913234 2.604280e-04 9.659379e-02 3.235832e-01 2 224841804 224841896 93 - 1.806 1.740 -0.222
ENSG00000135905 E060 58.8818060 2.524389e-04 1.935456e-03 2.493714e-02 2 224844753 224844839 87 - 1.837 1.715 -0.412
ENSG00000135905 E061 64.8857274 2.485035e-04 3.174024e-03 3.598651e-02 2 224845203 224845324 122 - 1.873 1.762 -0.374
ENSG00000135905 E062 69.9518880 2.220901e-04 1.909780e-01 4.703278e-01 2 224845519 224845642 124 - 1.875 1.827 -0.159
ENSG00000135905 E063 57.5622708 3.542747e-04 1.400963e-01 3.981846e-01 2 224849507 224849599 93 - 1.797 1.738 -0.199
ENSG00000135905 E064 43.9378432 3.900859e-04 4.101271e-02 1.965680e-01 2 224852377 224852442 66 - 1.699 1.606 -0.315
ENSG00000135905 E065 74.6009918 2.367455e-04 1.455290e-01 4.060928e-01 2 224852935 224853090 156 - 1.904 1.853 -0.172
ENSG00000135905 E066 34.1363041 2.787219e-03 2.926817e-02 1.605522e-01 2 224853091 224853122 32 - 1.604 1.484 -0.410
ENSG00000135905 E067 53.2112097 5.359773e-03 8.382515e-05 2.054078e-03 2 224854963 224855042 80 - 1.829 1.626 -0.687
ENSG00000135905 E068 68.0421465 2.189108e-04 2.574341e-05 7.637210e-04 2 224856860 224856982 123 - 1.913 1.759 -0.522
ENSG00000135905 E069 9.8743360 1.375234e-03 6.917766e-02 2.657427e-01 2 224860580 224862663 2084 - 0.942 1.106 0.602
ENSG00000135905 E070 43.8543034 3.182288e-04 3.903187e-03 4.171909e-02 2 224862664 224862746 83 - 1.716 1.585 -0.445
ENSG00000135905 E071 54.4919342 2.619794e-04 3.640574e-03 3.980351e-02 2 224864553 224864675 123 - 1.802 1.684 -0.402
ENSG00000135905 E072 70.7996640 6.057761e-04 2.748817e-04 5.416685e-03 2 224864866 224865087 222 - 1.921 1.787 -0.453
ENSG00000135905 E073 48.9539262 5.730968e-03 4.707209e-01 7.383197e-01 2 224873996 224874151 156 - 1.718 1.679 -0.131
ENSG00000135905 E074 33.2958466 5.591864e-03 4.710304e-02 2.132149e-01 2 224874266 224874349 84 - 1.593 1.474 -0.409
ENSG00000135905 E075 24.8222502 7.955338e-03 1.284943e-02 9.455524e-02 2 224874666 224874699 34 - 1.494 1.320 -0.602
ENSG00000135905 E076 24.2835259 2.603296e-03 8.119213e-04 1.275566e-02 2 224874700 224874751 52 - 1.501 1.289 -0.734
ENSG00000135905 E077 56.4653823 3.870854e-04 4.376423e-05 1.195129e-03 2 224876038 224876221 184 - 1.838 1.673 -0.561
ENSG00000135905 E078 48.4045866 1.502286e-03 7.193971e-03 6.423556e-02 2 224885671 224885805 135 - 1.754 1.631 -0.416
ENSG00000135905 E079 38.4787961 3.487734e-04 1.012131e-01 3.322516e-01 2 224886063 224886185 123 - 1.636 1.557 -0.269
ENSG00000135905 E080 0.2537694 1.604106e-02 2.566117e-01   2 224886186 224886254 69 - 0.000 0.170 12.546
ENSG00000135905 E081 25.3515092 9.435966e-04 4.030019e-02 1.946741e-01 2 224886459 224886526 68 - 1.480 1.358 -0.421
ENSG00000135905 E082 14.6730644 9.183136e-04 5.622397e-01 8.021330e-01 2 224886527 224886531 5 - 1.217 1.174 -0.154
ENSG00000135905 E083 6.9953291 4.168598e-02 6.729568e-01 8.645020e-01 2 224893342 224893547 206 - 0.875 0.926 0.196
ENSG00000135905 E084 7.2222252 3.522524e-02 9.917815e-01 1.000000e+00 2 224893548 224893652 105 - 0.916 0.914 -0.008
ENSG00000135905 E085 33.4839943 4.105246e-04 1.979350e-01 4.793206e-01 2 224896295 224896377 83 - 1.571 1.504 -0.227
ENSG00000135905 E086 44.0208953 4.466670e-03 3.354605e-01 6.272882e-01 2 224916695 224916784 90 - 1.679 1.628 -0.171
ENSG00000135905 E087 62.0982949 2.288190e-04 1.105644e-01 3.489627e-01 2 224931549 224931668 120 - 1.830 1.769 -0.206
ENSG00000135905 E088 60.7761974 6.826815e-03 6.984353e-03 6.299878e-02 2 224946847 224947065 219 - 1.858 1.719 -0.471
ENSG00000135905 E089 0.1268540 1.233037e-02 5.603359e-01   2 224982207 224982427 221 - 0.000 0.093 11.626
ENSG00000135905 E090 0.1186381 1.184356e-02 5.168538e-01   2 224983415 224983809 395 - 0.097 0.000 -12.494
ENSG00000135905 E091 3.5838254 4.038429e-03 2.375371e-01 5.265592e-01 2 225042252 225042468 217 - 0.574 0.726 0.652

Help

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