ENSG00000151292

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

  • Note:

    • About the Coding Potential: Please check the spreadsheet in the “Results” tag to confirm the coding potential. The above figure only show the predicted coding potential. The “gene_biotype” in the result spreadsheet is from the database record. Therefore, if you find conflicts between “gene_biotype” and “codingPotential”, please trust the “gene_biotype”.

    • Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

    • For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000345990 ENSG00000151292 No_inf pgKDN_inf CSNK1G3 protein_coding protein_coding 11.78765 12.55353 12.69678 1.649828 0.3420802 0.01635659 0.3268165 0.9804494 0.000000 0.9804494 0.0000000 -6.630011356 0.03196667 0.095900 0.000000 -0.095900 0.85947755 0.03024438 FALSE TRUE
ENST00000508708 ENSG00000151292 No_inf pgKDN_inf CSNK1G3 protein_coding protein_coding_CDS_not_defined 11.78765 12.55353 12.69678 1.649828 0.3420802 0.01635659 1.2773680 2.3587396 0.000000 1.4320660 0.0000000 -7.887975801 0.09197500 0.152400 0.000000 -0.152400 0.44126155 0.03024438   FALSE
ENST00000510842 ENSG00000151292 No_inf pgKDN_inf CSNK1G3 protein_coding protein_coding 11.78765 12.55353 12.69678 1.649828 0.3420802 0.01635659 0.5656758 1.1314935 0.565534 0.6554393 0.5655340 -0.987949605 0.04762500 0.100725 0.042150 -0.058575 0.82772450 0.03024438 FALSE TRUE
ENST00000515322 ENSG00000151292 No_inf pgKDN_inf CSNK1G3 protein_coding protein_coding 11.78765 12.55353 12.69678 1.649828 0.3420802 0.01635659 0.2794054 0.8382162 0.000000 0.8382162 0.0000000 -6.406360157 0.01899167 0.056975 0.000000 -0.056975 0.84312732 0.03024438 FALSE FALSE
ENST00000521364 ENSG00000151292 No_inf pgKDN_inf CSNK1G3 protein_coding protein_coding 11.78765 12.55353 12.69678 1.649828 0.3420802 0.01635659 0.3336135 1.0008405 0.000000 1.0008405 0.0000000 -6.659411518 0.02085000 0.062550 0.000000 -0.062550 0.84208527 0.03024438 FALSE TRUE
MSTRG.23421.1 ENSG00000151292 No_inf pgKDN_inf CSNK1G3 protein_coding   11.78765 12.55353 12.69678 1.649828 0.3420802 0.01635659 2.9987819 2.5804744 4.268735 1.6481533 0.5274945 0.723967868 0.28395000 0.269500 0.335750 0.066250 0.74904805 0.03024438 FALSE TRUE
MSTRG.23421.13 ENSG00000151292 No_inf pgKDN_inf CSNK1G3 protein_coding   11.78765 12.55353 12.69678 1.649828 0.3420802 0.01635659 3.9555504 3.6633201 3.683552 1.4194051 1.5469671 0.007924376 0.33112500 0.261925 0.295425 0.033500 1.00000000 0.03024438 FALSE TRUE
MSTRG.23421.7 ENSG00000151292 No_inf pgKDN_inf CSNK1G3 protein_coding   11.78765 12.55353 12.69678 1.649828 0.3420802 0.01635659 1.1618306 0.0000000 3.485492 0.0000000 1.5679116 8.449351608 0.08963333 0.000000 0.268900 0.268900 0.03024438 0.03024438 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

Help

Please Click HERE to learn more details about the results of IsoformSwitchAnalyzeR.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand pgKDN.inf No.inf log2fold_No.inf_pgKDN.inf
ENSG00000151292 E001 0.1265070 0.012272675 0.480613912   5 123512114 123512176 63 + 0.000 0.101 9.168
ENSG00000151292 E002 0.4982242 0.422686223 0.479322428   5 123512177 123512190 14 + 0.090 0.252 1.777
ENSG00000151292 E003 1.5056226 0.035923152 0.013181002 0.09619831 5 123512191 123512259 69 + 0.164 0.558 2.516
ENSG00000151292 E004 2.5032943 0.023651748 0.004074852 0.04298320 5 123512260 123512306 47 + 0.282 0.715 2.194
ENSG00000151292 E005 2.6942486 0.005247649 0.792095949 0.92056669 5 123512307 123512331 25 + 0.546 0.589 0.194
ENSG00000151292 E006 8.8096316 0.001651680 0.805400490 0.92792020 5 123512332 123512570 239 + 0.976 1.007 0.114
ENSG00000151292 E007 0.0000000       5 123545415 123545416 2 +      
ENSG00000151292 E008 11.1149665 0.001841564 0.846222187 0.94538713 5 123545417 123545633 217 + 1.087 1.079 -0.028
ENSG00000151292 E009 11.4572197 0.069800806 0.755286393 0.90358940 5 123545634 123545841 208 + 1.118 1.069 -0.176
ENSG00000151292 E010 0.2533610 0.016033984 0.205951377   5 123545842 123545956 115 + 0.000 0.183 12.154
ENSG00000151292 E011 0.0000000       5 123552965 123553106 142 +      
ENSG00000151292 E012 2.7938762 0.076069788 0.566529475 0.80470374 5 123553107 123553126 20 + 0.624 0.526 -0.443
ENSG00000151292 E013 2.3120837 0.006185947 0.662464472 0.85931124 5 123553127 123553147 21 + 0.546 0.491 -0.265
ENSG00000151292 E014 3.2733799 0.004409652 0.292608701 0.58613028 5 123557495 123557564 70 + 0.689 0.558 -0.571
ENSG00000151292 E015 9.2699784 0.004055597 0.680882237 0.86816715 5 123573393 123573541 149 + 1.026 0.996 -0.110
ENSG00000151292 E016 19.8061504 0.022921290 0.809534889 0.92970855 5 123575729 123575963 235 + 1.306 1.331 0.088
ENSG00000151292 E017 9.2743016 0.001544206 0.673325847 0.86474952 5 123588068 123588153 86 + 1.026 0.996 -0.110
ENSG00000151292 E018 0.0000000       5 123588425 123588426 2 +      
ENSG00000151292 E019 10.0893530 0.001391110 0.173413195 0.44667211 5 123588427 123588511 85 + 1.095 0.984 -0.405
ENSG00000151292 E020 1.9344798 0.007824452 0.200570459 0.48264700 5 123590410 123590412 3 + 0.546 0.363 -0.943
ENSG00000151292 E021 13.8736676 0.001313313 0.141309275 0.39983129 5 123590413 123590558 146 + 1.219 1.115 -0.370
ENSG00000151292 E022 8.8176319 0.005798603 0.637348052 0.84523174 5 123591319 123591414 96 + 0.966 1.018 0.194
ENSG00000151292 E023 0.7417352 0.459488095 0.717177849 0.88608504 5 123595039 123595134 96 + 0.164 0.311 1.193
ENSG00000151292 E024 8.7820011 0.001597878 0.644421663 0.84945346 5 123604724 123604830 107 + 1.007 0.972 -0.128
ENSG00000151292 E025 1.3754050 0.011383907 0.018964327 0.12262583 5 123605339 123605362 24 + 0.164 0.526 2.364
ENSG00000151292 E026 154.0650265 0.011913860 0.702519037 0.87898812 5 123614342 123617099 2758 + 2.181 2.200 0.066

Help

Please Click HERE to learn more details about the results from DEXseq.