ENSG00000151726

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

  • Note:

    • About the Coding Potential: Please check the spreadsheet in the “Results” tag to confirm the coding potential. The above figure only show the predicted coding potential. The “gene_biotype” in the result spreadsheet is from the database record. Therefore, if you find conflicts between “gene_biotype” and “codingPotential”, please trust the “gene_biotype”.

    • Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

    • For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000281455 ENSG00000151726 No_inf pgKDN_inf ACSL1 protein_coding protein_coding 20.61607 15.35763 22.69149 0.2660283 0.2937364 0.5628926 9.7210024 7.0901514 13.3651416 1.6431491 2.7525804 0.9136325 0.47316667 0.463925 0.594000 0.130075 0.826500318 0.008336253 FALSE TRUE
ENST00000454703 ENSG00000151726 No_inf pgKDN_inf ACSL1 protein_coding protein_coding 20.61607 15.35763 22.69149 0.2660283 0.2937364 0.5628926 8.0977081 5.2005972 7.2152411 2.0064676 2.8566096 0.4715970 0.38423333 0.336150 0.313225 -0.022925 1.000000000 0.008336253 FALSE TRUE
ENST00000513001 ENSG00000151726 No_inf pgKDN_inf ACSL1 protein_coding retained_intron 20.61607 15.35763 22.69149 0.2660283 0.2937364 0.5628926 1.0528002 1.9797424 0.2802479 0.3669646 0.1879046 -2.7772242 0.05973333 0.129525 0.012200 -0.117325 0.024216324 0.008336253   FALSE
ENST00000706366 ENSG00000151726 No_inf pgKDN_inf ACSL1 protein_coding protein_coding 20.61607 15.35763 22.69149 0.2660283 0.2937364 0.5628926 0.5973529 0.0000000 1.5713746 0.0000000 0.3928850 7.3050354 0.02586667 0.000000 0.069000 0.069000 0.008336253 0.008336253 FALSE TRUE
MSTRG.22610.4 ENSG00000151726 No_inf pgKDN_inf ACSL1 protein_coding   20.61607 15.35763 22.69149 0.2660283 0.2937364 0.5628926 0.6866273 0.9890972 0.0000000 0.5282122 0.0000000 -6.6425531 0.03696667 0.063900 0.000000 -0.063900 0.102013150 0.008336253 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

Help

Please Click HERE to learn more details about the results of IsoformSwitchAnalyzeR.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand pgKDN.inf No.inf log2fold_No.inf_pgKDN.inf
ENSG00000151726 E001 0.2545247 0.2383012122 0.1937175436   4 184755595 184755599 5 - 0.000 0.197 11.404
ENSG00000151726 E002 0.2545247 0.2383012122 0.1937175436   4 184755600 184755600 1 - 0.000 0.197 13.861
ENSG00000151726 E003 0.3715287 0.1536248369 0.4387643694   4 184755601 184755605 5 - 0.082 0.197 1.465
ENSG00000151726 E004 1.9342279 0.2484811864 0.3531659703 0.642971295 4 184755606 184755622 17 - 0.517 0.387 -0.672
ENSG00000151726 E005 2.1715692 0.2194037171 0.2438300219 0.533885041 4 184755623 184755628 6 - 0.569 0.387 -0.914
ENSG00000151726 E006 2.7886826 0.0259054992 0.4978187252 0.758427741 4 184755629 184755637 9 - 0.616 0.519 -0.442
ENSG00000151726 E007 6.2129876 0.0438818901 0.9675566932 0.993412053 4 184755638 184755680 43 - 0.848 0.865 0.066
ENSG00000151726 E008 12.2508614 0.0191417283 0.2021723885 0.484612978 4 184755681 184755735 55 - 1.058 1.187 0.464
ENSG00000151726 E009 47.5730842 0.0003745467 0.0001109541 0.002592807 4 184755736 184756058 323 - 1.604 1.767 0.554
ENSG00000151726 E010 63.1589137 0.0002817723 0.0365252919 0.183850219 4 184756059 184756355 297 - 1.769 1.845 0.258
ENSG00000151726 E011 17.5523668 0.0008428525 0.8103441017 0.930093611 4 184756356 184756410 55 - 1.257 1.275 0.061
ENSG00000151726 E012 52.7520928 0.0098217277 0.9735434327 0.995284040 4 184756411 184756780 370 - 1.727 1.727 0.000
ENSG00000151726 E013 22.4034703 0.0084013002 0.0953997559 0.321572336 4 184756781 184756902 122 - 1.415 1.294 -0.420
ENSG00000151726 E014 9.3748638 0.0132072048 0.8835822449 0.960882021 4 184756903 184756918 16 - 1.007 1.021 0.050
ENSG00000151726 E015 18.8610138 0.0063833556 0.9875642497 0.999831138 4 184756919 184757020 102 - 1.296 1.294 -0.005
ENSG00000151726 E016 12.1611387 0.0011439799 0.8291051483 0.938231630 4 184757021 184757046 26 - 1.124 1.107 -0.061
ENSG00000151726 E017 35.8352919 0.0031876064 0.5579160469 0.799684480 4 184757047 184757265 219 - 1.549 1.581 0.110
ENSG00000151726 E018 19.7512874 0.0007280124 0.6491122777 0.852116870 4 184757635 184757706 72 - 1.300 1.331 0.107
ENSG00000151726 E019 21.4927581 0.0006850191 0.2231559401 0.510664875 4 184757819 184757920 102 - 1.314 1.391 0.268
ENSG00000151726 E020 2.1319276 0.0478800697 0.0017096444 0.022622170 4 184757921 184758876 956 - 0.211 0.701 2.687
ENSG00000151726 E021 25.5880279 0.0005959256 0.7070771629 0.881169256 4 184760357 184760500 144 - 1.412 1.434 0.078
ENSG00000151726 E022 15.3453997 0.0008789876 0.9999660614 1.000000000 4 184762407 184762493 87 - 1.210 1.211 0.003
ENSG00000151726 E023 7.7736607 0.0018827730 0.6274328622 0.839945450 4 184762494 184762523 30 - 0.960 0.913 -0.177
ENSG00000151726 E024 8.9546684 0.0017565300 0.1475011682 0.408877755 4 184763167 184763255 89 - 1.050 0.913 -0.506
ENSG00000151726 E025 5.9573630 0.0079350361 0.8691575761 0.955000300 4 184764853 184764925 73 - 0.848 0.829 -0.071
ENSG00000151726 E026 7.4381619 0.0109043286 0.5663749709 0.804695352 4 184765891 184765986 96 - 0.896 0.957 0.228
ENSG00000151726 E027 10.8878374 0.0012914923 0.0903661820 0.312163560 4 184766622 184766756 135 - 1.130 0.983 -0.535
ENSG00000151726 E028 0.3711203 0.0165689065 0.4037973114   4 184768030 184768315 286 - 0.082 0.197 1.465
ENSG00000151726 E029 14.9879082 0.0097283264 0.9759168839 0.995932746 4 184768316 184768450 135 - 1.199 1.203 0.015
ENSG00000151726 E030 1.7148605 0.0078170198 0.5554175876 0.797993878 4 184770255 184770332 78 - 0.391 0.479 0.465
ENSG00000151726 E031 0.6335114 0.0274362219 0.0083332222 0.071058341 4 184770333 184770398 66 - 0.000 0.387 15.654
ENSG00000151726 E032 10.2441992 0.0500727580 0.8989284087 0.966871506 4 184770399 184770476 78 - 1.042 1.055 0.049
ENSG00000151726 E033 10.1232989 0.0013877124 0.0053901486 0.052314608 4 184773081 184773154 74 - 1.137 0.882 -0.943
ENSG00000151726 E034 9.5341774 0.0064575126 0.0412465637 0.197163180 4 184773663 184773714 52 - 1.096 0.898 -0.732
ENSG00000151726 E035 8.2300301 0.0312817596 0.3748836311 0.662549641 4 184773843 184773875 33 - 1.007 0.898 -0.409
ENSG00000151726 E036 13.4057383 0.0106528030 0.0641738964 0.255097686 4 184776484 184776662 179 - 1.221 1.055 -0.594
ENSG00000151726 E037 7.8110045 0.0058900926 0.0045112714 0.046102174 4 184776884 184776983 100 - 1.050 0.748 -1.150
ENSG00000151726 E038 8.8242345 0.0138682031 0.1459740086 0.406871430 4 184780332 184780433 102 - 1.050 0.898 -0.565
ENSG00000151726 E039 6.4023079 0.0022333070 0.1378301215 0.395050463 4 184783927 184783991 65 - 0.929 0.770 -0.618
ENSG00000151726 E040 0.3719033 0.2027334266 0.4552428068   4 184788379 184788513 135 - 0.082 0.197 1.465
ENSG00000151726 E041 9.9340425 0.0014221212 0.2165461823 0.502655554 4 184788617 184788731 115 - 1.081 0.970 -0.405
ENSG00000151726 E042 13.4911089 0.0122871436 0.7624430289 0.907301806 4 184803320 184803546 227 - 1.169 1.144 -0.088
ENSG00000151726 E043 0.0000000       4 184805527 184805788 262 -      
ENSG00000151726 E044 0.0000000       4 184808292 184808554 263 -      
ENSG00000151726 E045 0.0000000       4 184812160 184812259 100 -      
ENSG00000151726 E046 0.0000000       4 184813913 184813977 65 -      
ENSG00000151726 E047 0.0000000       4 184814998 184815124 127 -      
ENSG00000151726 E048 0.1272623 0.0123451916 0.3876292778   4 184825166 184825241 76 - 0.000 0.110 13.553
ENSG00000151726 E049 4.2265849 0.0051516965 0.2025089282 0.484927141 4 184825916 184826119 204 - 0.778 0.619 -0.661
ENSG00000151726 E050 0.0000000       4 184826525 184826818 294 -      

Help

Please Click HERE to learn more details about the results from DEXseq.