ENSG00000160796

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

  • Note:

    • About the Coding Potential: Please check the spreadsheet in the “Results” tag to confirm the coding potential. The above figure only show the predicted coding potential. The “gene_biotype” in the result spreadsheet is from the database record. Therefore, if you find conflicts between “gene_biotype” and “codingPotential”, please trust the “gene_biotype”.

    • Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

    • For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000461036 ENSG00000160796 No_inf pgKDN_inf NBEAL2 protein_coding retained_intron 32.30358 58.53967 16.44067 2.931992 2.444511 -1.831515 0.9297836 2.789351 0.0000000 1.3385574 0.0000000 -8.12894841 0.01706667 0.051200 0.000000 -0.051200 2.804362e-01 7.985066e-05 FALSE  
ENST00000477412 ENSG00000160796 No_inf pgKDN_inf NBEAL2 protein_coding retained_intron 32.30358 58.53967 16.44067 2.931992 2.444511 -1.831515 3.6015741 6.699130 1.6099421 2.2436729 0.8910034 -2.05018346 0.10251667 0.109325 0.084875 -0.024450 9.609392e-01 7.985066e-05 FALSE  
ENST00000651350 ENSG00000160796 No_inf pgKDN_inf NBEAL2 protein_coding retained_intron 32.30358 58.53967 16.44067 2.931992 2.444511 -1.831515 1.9553985 5.491261 0.0000000 0.4735549 0.0000000 -9.10361862 0.03625000 0.093650 0.000000 -0.093650 7.985066e-05 7.985066e-05 FALSE  
MSTRG.20095.11 ENSG00000160796 No_inf pgKDN_inf NBEAL2 protein_coding   32.30358 58.53967 16.44067 2.931992 2.444511 -1.831515 2.4066188 5.208524 1.2089483 0.7652153 0.4084767 -2.09800492 0.06739167 0.088500 0.073225 -0.015275 8.780713e-01 7.985066e-05 FALSE  
MSTRG.20095.14 ENSG00000160796 No_inf pgKDN_inf NBEAL2 protein_coding   32.30358 58.53967 16.44067 2.931992 2.444511 -1.831515 1.7309526 2.020174 1.3478276 2.0201737 1.0686078 -0.58030289 0.06967500 0.033325 0.095800 0.062475 6.897618e-01 7.985066e-05 FALSE  
MSTRG.20095.15 ENSG00000160796 No_inf pgKDN_inf NBEAL2 protein_coding   32.30358 58.53967 16.44067 2.931992 2.444511 -1.831515 7.1868946 10.636402 5.0791185 3.5723379 1.1362297 -1.06487826 0.26089167 0.184825 0.320225 0.135400 8.063089e-01 7.985066e-05 TRUE  
MSTRG.20095.17 ENSG00000160796 No_inf pgKDN_inf NBEAL2 protein_coding   32.30358 58.53967 16.44067 2.931992 2.444511 -1.831515 2.7858074 6.638004 0.2844806 1.0913247 0.2844806 -4.49667680 0.06512500 0.113675 0.020500 -0.093175 1.019338e-01 7.985066e-05 FALSE  
MSTRG.20095.2 ENSG00000160796 No_inf pgKDN_inf NBEAL2 protein_coding   32.30358 58.53967 16.44067 2.931992 2.444511 -1.831515 1.5401641 1.940880 1.8578203 1.9408797 0.8589063 -0.06276914 0.06482500 0.032950 0.116275 0.083325 2.839097e-01 7.985066e-05 FALSE  
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

Help

Please Click HERE to learn more details about the results of IsoformSwitchAnalyzeR.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand pgKDN.inf No.inf log2fold_No.inf_pgKDN.inf
ENSG00000160796 E001 0.1170040 0.0119406545 0.1255952539   3 46979666 46979679 14 + 0.162 0.000 -11.641
ENSG00000160796 E002 0.3707734 0.0167710776 0.6170679215   3 46979680 46979762 83 + 0.162 0.102 -0.777
ENSG00000160796 E003 1.6034343 0.1089072708 0.2555014953 0.547458848 3 46979763 46979845 83 + 0.514 0.313 -1.099
ENSG00000160796 E004 1.9651078 0.1370299012 0.0993296160 0.329167480 3 46979846 46979912 67 + 0.620 0.340 -1.415
ENSG00000160796 E005 0.0000000       3 46987990 46988077 88 +      
ENSG00000160796 E006 0.9806144 0.0119143660 0.0937793738 0.318477768 3 46988669 46988685 17 + 0.449 0.184 -1.777
ENSG00000160796 E007 2.6217140 0.0054807064 0.8931110005 0.964518635 3 46988686 46988757 72 + 0.514 0.494 -0.099
ENSG00000160796 E008 5.4415507 0.0031303758 0.0407699561 0.195926830 3 46988842 46988970 129 + 0.916 0.672 -0.970
ENSG00000160796 E009 4.2917238 0.0033272208 0.0008589707 0.013339397 3 46989085 46989166 82 + 0.940 0.529 -1.695
ENSG00000160796 E010 5.1868109 0.0027009909 0.0248781876 0.144994615 3 46989260 46989381 122 + 0.916 0.647 -1.077
ENSG00000160796 E011 4.6310971 0.0038801393 0.5917822706 0.819629310 3 46989511 46989593 83 + 0.620 0.696 0.323
ENSG00000160796 E012 5.9993297 0.0024505612 0.7743879171 0.913294929 3 46991219 46991304 86 + 0.743 0.780 0.149
ENSG00000160796 E013 10.0814077 0.0059872094 0.3477784744 0.638348833 3 46991406 46991688 283 + 1.040 0.945 -0.354
ENSG00000160796 E014 5.5970845 0.0277399646 0.3605320649 0.650180105 3 46991840 46991946 107 + 0.838 0.719 -0.477
ENSG00000160796 E015 0.9756443 0.2059432999 0.1407881902 0.399120644 3 46992475 46992555 81 + 0.449 0.184 -1.776
ENSG00000160796 E016 0.4889692 0.4287904632 0.3235627851   3 46993876 46993936 61 + 0.280 0.102 -1.776
ENSG00000160796 E017 4.8273725 0.0028513446 0.0616707457 0.249562830 3 46993937 46994020 84 + 0.866 0.634 -0.940
ENSG00000160796 E018 5.7353301 0.0438120609 0.6414974273 0.847795203 3 46994455 46994553 99 + 0.809 0.740 -0.275
ENSG00000160796 E019 10.6685713 0.0013080813 0.1649531531 0.434424697 3 46995032 46995320 289 + 0.866 1.017 0.565
ENSG00000160796 E020 11.6601405 0.0012369590 0.3127645249 0.606169576 3 46995321 46995633 313 + 0.940 1.043 0.383
ENSG00000160796 E021 8.1348431 0.0016714497 0.6176700109 0.834504368 3 46995714 46995846 133 + 0.838 0.896 0.223
ENSG00000160796 E022 8.6526989 0.0033183469 0.2956852137 0.588715016 3 46995932 46996051 120 + 0.809 0.931 0.471
ENSG00000160796 E023 14.8918238 0.0009259318 0.5274188997 0.779419794 3 46996271 46996592 322 + 1.075 1.132 0.208
ENSG00000160796 E024 6.2283399 0.0166453227 0.5870966507 0.816880049 3 46996751 46996828 78 + 0.838 0.770 -0.268
ENSG00000160796 E025 3.8706797 0.0043031642 0.9966605888 1.000000000 3 46996829 46996833 5 + 0.620 0.620 0.001
ENSG00000160796 E026 0.0000000       3 46996834 46996953 120 +      
ENSG00000160796 E027 6.3539626 0.0029051362 0.6239790955 0.838178091 3 46996954 46997046 93 + 0.838 0.780 -0.229
ENSG00000160796 E028 10.4629125 0.0034092703 0.4418561746 0.717220060 3 46997259 46997433 175 + 1.040 0.964 -0.282
ENSG00000160796 E029 10.4054922 0.0014914007 0.3175418945 0.610310795 3 46997561 46997694 134 + 0.892 1.000 0.404
ENSG00000160796 E030 0.1272623 0.0123840408 1.0000000000   3 46997695 46997696 2 + 0.000 0.054 11.661
ENSG00000160796 E031 10.7386787 0.0084982578 0.8869006015 0.962146935 3 46998067 46998226 160 + 1.003 0.988 -0.055
ENSG00000160796 E032 10.3476953 0.0014656023 0.5592648387 0.800501329 3 46998463 46998565 103 + 1.022 0.964 -0.215
ENSG00000160796 E033 11.0911308 0.0012440733 0.4690032330 0.737018746 3 46998717 46998879 163 + 1.058 0.988 -0.256
ENSG00000160796 E034 3.7321815 0.0136434792 0.3649219033 0.653359227 3 46998959 46998962 4 + 0.706 0.577 -0.555
ENSG00000160796 E035 8.9577042 0.0015540957 0.1964646244 0.477136272 3 46998963 46999117 155 + 1.022 0.889 -0.497
ENSG00000160796 E036 10.2786313 0.0086900726 0.3681664511 0.656658268 3 46999315 46999474 160 + 0.892 0.994 0.382
ENSG00000160796 E037 0.2539903 0.0160657442 1.0000000000   3 46999590 46999629 40 + 0.000 0.102 12.595
ENSG00000160796 E038 8.1099463 0.0119283077 0.7055048673 0.880388233 3 46999630 46999715 86 + 0.916 0.874 -0.162
ENSG00000160796 E039 19.3395800 0.0006874382 0.5652919785 0.804190166 3 46999889 47000195 307 + 1.261 1.217 -0.155
ENSG00000160796 E040 17.3255582 0.0020817034 0.3635752128 0.652418968 3 47000196 47000404 209 + 1.238 1.165 -0.260
ENSG00000160796 E041 0.7519000 0.0133459644 0.7665860451 0.909421986 3 47000405 47000446 42 + 0.162 0.220 0.545
ENSG00000160796 E042 6.3621639 0.0031558921 0.8713333171 0.955763285 3 47000522 47000949 428 + 0.809 0.789 -0.077
ENSG00000160796 E043 2.4822644 0.2366664845 0.7010953346 0.878245866 3 47000950 47001000 51 + 0.570 0.455 -0.555
ENSG00000160796 E044 17.5029777 0.0014921166 0.7497046576 0.901388461 3 47001001 47001179 179 + 1.164 1.192 0.097
ENSG00000160796 E045 1.1327416 0.0105443756 0.3899506655 0.675475308 3 47001180 47001278 99 + 0.162 0.313 1.223
ENSG00000160796 E046 13.9983000 0.0024003518 0.7781977791 0.914866436 3 47001279 47001438 160 + 1.075 1.102 0.098
ENSG00000160796 E047 15.6891051 0.0010006308 0.2470588403 0.537661002 3 47001689 47001826 138 + 1.215 1.119 -0.341
ENSG00000160796 E048 13.3489999 0.0112277236 0.7058686431 0.880605093 3 47001920 47002032 113 + 1.107 1.069 -0.138
ENSG00000160796 E049 18.6658032 0.0028286516 0.2746318549 0.568152015 3 47002033 47002288 256 + 1.136 1.230 0.335
ENSG00000160796 E050 14.1048070 0.0121386131 0.7508476448 0.901699291 3 47002371 47002520 150 + 1.122 1.092 -0.106
ENSG00000160796 E051 13.0065200 0.0010666146 0.7291586426 0.892002699 3 47002645 47002802 158 + 1.040 1.073 0.121
ENSG00000160796 E052 9.4470025 0.0392203702 0.2454950289 0.536010399 3 47002957 47003037 81 + 1.058 0.904 -0.573
ENSG00000160796 E053 7.7339804 0.0361174286 0.7910648022 0.919937737 3 47003038 47003081 44 + 0.892 0.858 -0.130
ENSG00000160796 E054 2.2832391 0.1394141363 0.0185461297 0.120644911 3 47003082 47003173 92 + 0.000 0.529 15.142
ENSG00000160796 E055 11.7144291 0.0113642258 0.5263869429 0.778734557 3 47003174 47003309 136 + 1.075 1.011 -0.233
ENSG00000160796 E056 1.4794439 0.0987657683 0.1839221450 0.460993446 3 47003310 47003383 74 + 0.514 0.285 -1.292
ENSG00000160796 E057 4.8428288 0.0241800151 0.2707907246 0.564479328 3 47003816 47003819 4 + 0.809 0.660 -0.607
ENSG00000160796 E058 16.3196658 0.0025670839 0.2736209603 0.567358549 3 47003820 47003926 107 + 1.227 1.137 -0.321
ENSG00000160796 E059 13.1617057 0.0011001720 0.2629709966 0.555850358 3 47003927 47003976 50 + 0.983 1.092 0.401
ENSG00000160796 E060 20.0105829 0.0077622978 0.8439373828 0.944185376 3 47004077 47004171 95 + 1.227 1.244 0.059
ENSG00000160796 E061 32.5326519 0.0025909967 0.5016583356 0.761577289 3 47004172 47004393 222 + 1.406 1.451 0.155
ENSG00000160796 E062 5.9315195 0.0024700421 0.0110146977 0.085625066 3 47004394 47004494 101 + 0.449 0.825 1.649
ENSG00000160796 E063 20.0269785 0.0009131195 0.4333826708 0.710825317 3 47004495 47004590 96 + 1.190 1.253 0.223
ENSG00000160796 E064 4.4066610 0.0032177152 0.0913604059 0.313967123 3 47004591 47004618 28 + 0.449 0.707 1.177
ENSG00000160796 E065 14.0030793 0.0144745997 0.0002347547 0.004770634 3 47004619 47004971 353 + 0.706 1.161 1.725
ENSG00000160796 E066 8.7483646 0.0016514811 0.9546801380 0.988988698 3 47004972 47004989 18 + 0.916 0.911 -0.022
ENSG00000160796 E067 18.5950793 0.0008596621 0.6446282347 0.849510722 3 47004990 47005096 107 + 1.238 1.203 -0.127
ENSG00000160796 E068 0.3809057 0.0158523964 0.6820949661   3 47005144 47005180 37 + 0.000 0.145 13.131
ENSG00000160796 E069 24.0539230 0.0006550618 0.1407295731 0.399017390 3 47005181 47005280 100 + 1.227 1.338 0.388
ENSG00000160796 E070 14.5029300 0.0009719013 0.7938859514 0.921380406 3 47005281 47005321 41 + 1.091 1.115 0.087
ENSG00000160796 E071 0.2545247 0.2853104029 1.0000000000   3 47005322 47005488 167 + 0.000 0.102 12.164
ENSG00000160796 E072 23.5712987 0.0006291738 0.3586797603 0.648158193 3 47005489 47005619 131 + 1.357 1.293 -0.222
ENSG00000160796 E073 0.2455571 0.0164936743 0.3327280725   3 47005620 47005737 118 + 0.162 0.054 -1.777
ENSG00000160796 E074 13.0035102 0.0059207017 0.7420888873 0.897918563 3 47005738 47005786 49 + 1.040 1.073 0.121
ENSG00000160796 E075 16.1587197 0.0009422987 0.3794309038 0.666216021 3 47005787 47005847 61 + 1.091 1.169 0.280
ENSG00000160796 E076 0.6164842 0.0203235808 0.3847216331 0.670790953 3 47005848 47005945 98 + 0.280 0.145 -1.192
ENSG00000160796 E077 24.2282312 0.0005739638 0.8343618670 0.940355913 3 47005946 47006063 118 + 1.330 1.316 -0.050
ENSG00000160796 E078 1.7610896 0.0107032273 0.4394981963 0.715502904 3 47006064 47006164 101 + 0.280 0.413 0.808
ENSG00000160796 E079 10.3680739 0.0142646533 0.9442576690 0.984572234 3 47006165 47006173 9 + 0.983 0.976 -0.025
ENSG00000160796 E080 28.1507077 0.0005568708 0.1588466533 0.425932601 3 47006174 47006262 89 + 1.450 1.361 -0.309
ENSG00000160796 E081 1.2438572 0.0996682500 0.6066855769 0.828839648 3 47006263 47006332 70 + 0.373 0.285 -0.554
ENSG00000160796 E082 34.8315748 0.0003978526 0.6625011532 0.859318852 3 47006333 47006449 117 + 1.490 1.465 -0.087
ENSG00000160796 E083 14.7130318 0.0009787222 0.0073882278 0.065495838 3 47006450 47007050 601 + 0.892 1.161 0.989
ENSG00000160796 E084 2.0132556 0.0069333142 0.3068997517 0.600157042 3 47007051 47007065 15 + 0.280 0.455 1.030
ENSG00000160796 E085 21.6721403 0.0006466906 0.2624974430 0.555328199 3 47007066 47007116 51 + 1.203 1.290 0.308
ENSG00000160796 E086 15.7082448 0.0008564971 0.0217896338 0.133957528 3 47007117 47007155 39 + 0.962 1.180 0.795
ENSG00000160796 E087 2.2235927 0.0078030181 0.1250364158 0.374914326 3 47007156 47007240 85 + 0.620 0.390 -1.125
ENSG00000160796 E088 23.1531209 0.0005829410 0.3967801412 0.681331470 3 47007241 47007322 82 + 1.250 1.313 0.223
ENSG00000160796 E089 17.0339041 0.0015077938 0.3317173197 0.623874252 3 47007323 47007350 28 + 1.107 1.192 0.304
ENSG00000160796 E090 8.8045848 0.0018780485 0.0398042232 0.193407194 3 47007351 47007524 174 + 0.706 0.957 0.984
ENSG00000160796 E091 39.1839210 0.0004397096 0.5753249808 0.809832608 3 47007525 47007697 173 + 1.544 1.513 -0.105
ENSG00000160796 E092 0.8698749 0.0133391956 0.7140607203 0.884874248 3 47007698 47007762 65 + 0.280 0.220 -0.455
ENSG00000160796 E093 1.2330315 0.0101792248 0.2223349134 0.509637500 3 47007763 47007815 53 + 0.449 0.254 -1.192
ENSG00000160796 E094 23.4799897 0.0006898211 0.9420038059 0.983632639 3 47007816 47007910 95 + 1.302 1.308 0.021
ENSG00000160796 E095 2.0228556 0.0152683152 0.0821710492 0.295090516 3 47007911 47008069 159 + 0.162 0.475 2.130
ENSG00000160796 E096 25.9609156 0.0008352078 0.0447707628 0.206918960 3 47008070 47008186 117 + 1.227 1.376 0.520
ENSG00000160796 E097 1.2509680 0.1908551911 0.8771283978 0.958307193 3 47008187 47008282 96 + 0.280 0.313 0.223
ENSG00000160796 E098 37.5961537 0.0154373444 0.9190964714 0.974608727 3 47008283 47008441 159 + 1.509 1.501 -0.027
ENSG00000160796 E099 1.7411124 0.1112362468 0.6459187389 0.850210974 3 47008442 47008519 78 + 0.449 0.366 -0.456
ENSG00000160796 E100 39.4539845 0.0023260511 0.7262887495 0.890426837 3 47008520 47008668 149 + 1.538 1.518 -0.068
ENSG00000160796 E101 0.8879746 0.0124877898 0.1495294738 0.411843665 3 47008669 47008988 320 + 0.000 0.285 14.211
ENSG00000160796 E102 31.9929718 0.0004939992 0.9087701386 0.971102626 3 47008989 47009124 136 + 1.429 1.436 0.027
ENSG00000160796 E103 0.0000000       3 47009125 47009218 94 +      
ENSG00000160796 E104 49.2985176 0.0003138371 0.0194453094 0.124674669 3 47009219 47009704 486 + 1.702 1.590 -0.380

Help

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