ENSG00000169045

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

  • Note:

    • About the Coding Potential: Please check the spreadsheet in the “Results” tag to confirm the coding potential. The above figure only show the predicted coding potential. The “gene_biotype” in the result spreadsheet is from the database record. Therefore, if you find conflicts between “gene_biotype” and “codingPotential”, please trust the “gene_biotype”.

    • Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

    • For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000510411 ENSG00000169045 No_inf pgKDN_inf HNRNPH1 protein_coding protein_coding 353.8693 367.1821 316.963 11.26478 8.661331 -0.2121754 18.78788 0.00000 30.70175 0.000000 7.0221153 11.5845749 0.05540833 0.000000 0.095975 0.095975 2.866609e-26 6.130106e-39 FALSE  
ENST00000510678 ENSG00000169045 No_inf pgKDN_inf HNRNPH1 protein_coding nonsense_mediated_decay 353.8693 367.1821 316.963 11.26478 8.661331 -0.2121754 40.40391 52.07074 30.79878 4.031392 1.5054845 -0.7574086 0.11428333 0.141600 0.097700 -0.043900 2.392326e-01 6.130106e-39 FALSE  
ENST00000519033 ENSG00000169045 No_inf pgKDN_inf HNRNPH1 protein_coding protein_coding 353.8693 367.1821 316.963 11.26478 8.661331 -0.2121754 13.67440 32.68332 0.00000 1.151039 0.0000000 -11.6747802 0.03755833 0.089000 0.000000 -0.089000 6.130106e-39 6.130106e-39 FALSE  
ENST00000523449 ENSG00000169045 No_inf pgKDN_inf HNRNPH1 protein_coding protein_coding 353.8693 367.1821 316.963 11.26478 8.661331 -0.2121754 41.54691 38.69477 45.21654 7.846495 4.1738057 0.2246581 0.11779167 0.103925 0.142500 0.038575 5.646986e-01 6.130106e-39 FALSE  
MSTRG.24027.22 ENSG00000169045 No_inf pgKDN_inf HNRNPH1 protein_coding   353.8693 367.1821 316.963 11.26478 8.661331 -0.2121754 30.45508 42.99260 22.48385 1.967191 0.8898026 -0.9348931 0.08630000 0.117850 0.071325 -0.046525 8.864267e-02 6.130106e-39 FALSE  
MSTRG.24027.5 ENSG00000169045 No_inf pgKDN_inf HNRNPH1 protein_coding   353.8693 367.1821 316.963 11.26478 8.661331 -0.2121754 87.98157 73.82978 93.22309 3.224685 2.3652897 0.3364439 0.25181667 0.201900 0.294850 0.092950 2.289260e-02 6.130106e-39 FALSE  
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

Help

Please Click HERE to learn more details about the results of IsoformSwitchAnalyzeR.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand pgKDN.inf No.inf log2fold_No.inf_pgKDN.inf
ENSG00000169045 E001 2.6930643 5.794819e-02 6.396993e-01 8.468299e-01 5 179614178 179614178 1 - 0.607 0.529 -0.355
ENSG00000169045 E002 4.8016992 3.662343e-02 7.677916e-01 9.101315e-01 5 179614179 179614179 1 - 0.735 0.777 0.169
ENSG00000169045 E003 5.9010844 3.380807e-02 9.941797e-01 1.000000e+00 5 179614180 179614180 1 - 0.833 0.835 0.008
ENSG00000169045 E004 302.2274087 1.512773e-03 8.760302e-02 3.067152e-01 5 179614181 179614518 338 - 2.498 2.460 -0.128
ENSG00000169045 E005 121.5546611 2.319093e-03 8.874727e-01 9.623611e-01 5 179614519 179614523 5 - 2.079 2.086 0.021
ENSG00000169045 E006 285.7682510 7.356381e-05 2.649830e-02 1.508192e-01 5 179614524 179614685 162 - 2.474 2.436 -0.127
ENSG00000169045 E007 169.4663706 2.234296e-03 1.472177e-02 1.037317e-01 5 179614686 179614777 92 - 2.267 2.194 -0.242
ENSG00000169045 E008 165.9509814 3.259460e-04 1.970694e-01 4.782336e-01 5 179614778 179614876 99 - 2.234 2.204 -0.100
ENSG00000169045 E009 121.4399136 1.401730e-04 5.487242e-01 7.936215e-01 5 179614877 179614889 13 - 2.091 2.076 -0.050
ENSG00000169045 E010 176.8769744 1.870416e-03 9.481859e-01 9.865401e-01 5 179614890 179614959 70 - 2.245 2.245 0.000
ENSG00000169045 E011 20.7327454 2.223961e-03 7.410642e-04 1.189540e-02 5 179614960 179615545 586 - 1.179 1.417 0.831
ENSG00000169045 E012 97.9698954 2.906614e-03 6.049413e-01 8.277789e-01 5 179615546 179615559 14 - 2.000 1.982 -0.061
ENSG00000169045 E013 116.0301702 1.823623e-03 4.879235e-01 7.513609e-01 5 179615560 179615595 36 - 2.075 2.054 -0.073
ENSG00000169045 E014 17.0062644 9.114283e-04 3.363339e-03 3.762670e-02 5 179615596 179616125 530 - 1.111 1.329 0.773
ENSG00000169045 E015 97.5087403 1.695950e-03 7.224694e-01 8.884375e-01 5 179616126 179616140 15 - 1.994 1.983 -0.037
ENSG00000169045 E016 102.8595821 3.295122e-04 3.960636e-01 6.808996e-01 5 179616141 179616157 17 - 2.025 2.001 -0.082
ENSG00000169045 E017 177.6188330 1.661109e-04 6.096925e-01 8.301746e-01 5 179616158 179616218 61 - 2.238 2.252 0.046
ENSG00000169045 E018 91.4750918 9.361567e-04 1.102062e-20 3.130844e-18 5 179616219 179616763 545 - 1.731 2.074 1.152
ENSG00000169045 E019 20.2671955 6.991613e-04 2.000454e-04 4.186748e-03 5 179616764 179616859 96 - 1.155 1.413 0.906
ENSG00000169045 E020 11.7230719 1.312707e-03 2.925306e-04 5.689630e-03 5 179616860 179616868 9 - 0.883 1.208 1.189
ENSG00000169045 E021 96.0178581 8.743893e-04 6.170534e-01 8.341310e-01 5 179616869 179616873 5 - 1.971 1.989 0.062
ENSG00000169045 E022 137.8394459 4.376686e-04 6.761851e-01 8.658391e-01 5 179616874 179616898 25 - 2.143 2.133 -0.032
ENSG00000169045 E023 194.9119362 3.002667e-03 9.035904e-01 9.690425e-01 5 179616899 179616958 60 - 2.283 2.289 0.018
ENSG00000169045 E024 24.6587938 6.812727e-03 1.503906e-05 4.843691e-04 5 179616959 179617020 62 - 1.195 1.510 1.097
ENSG00000169045 E025 25.3684947 5.598856e-04 1.566971e-05 5.012635e-04 5 179617021 179617050 30 - 1.239 1.510 0.942
ENSG00000169045 E026 110.8447928 5.055375e-04 3.690419e-01 6.574439e-01 5 179617051 179617059 9 - 2.026 2.055 0.098
ENSG00000169045 E027 93.5930898 1.958629e-04 6.643634e-02 2.596129e-01 5 179617060 179617110 51 - 1.934 1.995 0.203
ENSG00000169045 E028 15.4163039 8.943629e-04 1.662982e-09 1.358958e-07 5 179617111 179617513 403 - 0.851 1.359 1.844
ENSG00000169045 E029 217.3018985 1.646821e-04 7.657339e-01 9.089309e-01 5 179617514 179617649 136 - 2.336 2.332 -0.015
ENSG00000169045 E030 145.5038362 1.156162e-04 3.336989e-01 6.256594e-01 5 179617799 179617816 18 - 2.173 2.151 -0.076
ENSG00000169045 E031 241.5768496 1.233066e-04 2.039239e-01 4.866350e-01 5 179617817 179617911 95 - 2.393 2.369 -0.078
ENSG00000169045 E032 131.6993172 1.544292e-03 9.816285e-02 3.267894e-01 5 179617912 179617932 21 - 2.145 2.096 -0.164
ENSG00000169045 E033 11.4615064 3.576182e-03 7.047014e-04 1.140240e-02 5 179617933 179617988 56 - 0.883 1.196 1.148
ENSG00000169045 E034 190.6365108 8.968443e-04 9.643480e-03 7.848369e-02 5 179617989 179618044 56 - 2.312 2.249 -0.210
ENSG00000169045 E035 126.5335784 1.484992e-04 4.221247e-03 4.409621e-02 5 179618045 179618060 16 - 2.143 2.067 -0.254
ENSG00000169045 E036 1.1233958 1.267001e-02 1.815650e-01 4.575519e-01 5 179618144 179618144 1 - 0.191 0.401 1.452
ENSG00000169045 E037 127.2155882 1.295871e-04 1.146748e-01 3.569293e-01 5 179618145 179618160 16 - 2.126 2.085 -0.137
ENSG00000169045 E038 149.4479595 1.102685e-04 8.503339e-04 1.323194e-02 5 179618161 179618204 44 - 2.217 2.136 -0.272
ENSG00000169045 E039 105.0102333 1.536182e-04 1.973029e-02 1.258138e-01 5 179618205 179618207 3 - 2.058 1.990 -0.227
ENSG00000169045 E040 111.3263011 1.492689e-04 4.992778e-03 4.955474e-02 5 179618208 179618217 10 - 2.089 2.010 -0.266
ENSG00000169045 E041 100.2991861 8.953311e-04 8.192124e-04 1.285388e-02 5 179618218 179618223 6 - 2.059 1.952 -0.358
ENSG00000169045 E042 92.4929649 1.860605e-04 2.790123e-05 8.160655e-04 5 179618224 179618235 12 - 2.036 1.905 -0.439
ENSG00000169045 E043 82.1868422 1.792886e-04 3.682241e-05 1.026877e-03 5 179618236 179618238 3 - 1.988 1.852 -0.458
ENSG00000169045 E044 176.0991539 1.028707e-04 7.982871e-08 4.752187e-06 5 179618239 179618323 85 - 2.309 2.188 -0.405
ENSG00000169045 E045 283.7592570 6.575600e-05 1.069860e-56 2.622811e-53 5 179618324 179619100 777 - 2.245 2.554 1.028
ENSG00000169045 E046 97.0758309 9.972158e-04 2.752587e-17 5.799141e-15 5 179619101 179619268 168 - 1.788 2.089 1.011
ENSG00000169045 E047 80.6780055 1.853287e-04 5.689924e-04 9.656399e-03 5 179619269 179619272 4 - 1.969 1.855 -0.386
ENSG00000169045 E048 118.0424580 5.264885e-04 1.953529e-06 8.328982e-05 5 179619273 179619300 28 - 2.144 2.007 -0.460
ENSG00000169045 E049 87.4033390 2.305972e-04 2.226965e-06 9.296372e-05 5 179619301 179619314 14 - 2.023 1.870 -0.512
ENSG00000169045 E050 112.1536997 1.278481e-03 1.694868e-07 9.404425e-06 5 179619315 179619360 46 - 2.136 1.970 -0.556
ENSG00000169045 E051 94.8576787 1.703715e-04 6.963972e-05 1.746141e-03 5 179619361 179619407 47 - 2.043 1.920 -0.411
ENSG00000169045 E052 33.0553851 1.500589e-03 6.050322e-06 2.215682e-04 5 179619408 179619468 61 - 1.359 1.618 0.888
ENSG00000169045 E053 133.1252895 8.563969e-04 7.373796e-19 1.791434e-16 5 179619469 179620037 569 - 1.945 2.217 0.908
ENSG00000169045 E054 175.7518231 9.626821e-05 3.449561e-28 1.806297e-25 5 179620038 179620674 637 - 2.066 2.336 0.903
ENSG00000169045 E055 35.8330447 2.996955e-03 3.063203e-07 1.602432e-05 5 179620675 179620732 58 - 1.364 1.663 1.024
ENSG00000169045 E056 37.7510066 1.481304e-02 5.389928e-06 2.008987e-04 5 179620733 179620772 40 - 1.354 1.696 1.174
ENSG00000169045 E057 42.4978935 8.421774e-03 6.104300e-08 3.732551e-06 5 179620773 179620813 41 - 1.399 1.748 1.191
ENSG00000169045 E058 36.8873917 2.995171e-03 3.630659e-09 2.801373e-07 5 179620814 179620891 78 - 1.343 1.687 1.179
ENSG00000169045 E059 60.8259508 2.291334e-04 2.155436e-03 2.700378e-02 5 179620892 179620896 5 - 1.850 1.733 -0.396
ENSG00000169045 E060 89.7159899 3.281531e-04 2.830664e-04 5.533495e-03 5 179620897 179620942 46 - 2.016 1.900 -0.390
ENSG00000169045 E061 103.7037074 2.646143e-03 1.330574e-01 3.873438e-01 5 179620943 179621010 68 - 2.045 1.991 -0.180
ENSG00000169045 E062 79.9595167 1.937410e-04 3.859800e-02 1.900096e-01 5 179621011 179621035 25 - 1.941 1.873 -0.231
ENSG00000169045 E063 38.9763085 3.725544e-04 4.026842e-10 3.706206e-08 5 179621036 179621241 206 - 1.380 1.706 1.116
ENSG00000169045 E064 72.7571670 2.598178e-04 9.728369e-02 3.248854e-01 5 179621242 179621253 12 - 1.895 1.837 -0.194
ENSG00000169045 E065 141.1329109 1.267464e-04 4.495991e-06 1.717329e-04 5 179621254 179621346 93 - 2.211 2.095 -0.387
ENSG00000169045 E066 62.6142618 3.336911e-03 1.997269e-05 6.176646e-04 5 179621347 179621370 24 - 1.898 1.708 -0.643
ENSG00000169045 E067 67.2480996 3.057893e-04 7.075381e-05 1.771604e-03 5 179621371 179621397 27 - 1.907 1.761 -0.491
ENSG00000169045 E068 88.1477340 8.300315e-03 2.950853e-09 2.323377e-07 5 179621398 179621842 445 - 1.738 2.050 1.051
ENSG00000169045 E069 26.4762724 6.291720e-04 5.644832e-10 5.048895e-08 5 179621843 179621950 108 - 1.163 1.560 1.379
ENSG00000169045 E070 14.4686030 2.237064e-03 4.420669e-05 1.205381e-03 5 179621951 179621976 26 - 0.956 1.297 1.230
ENSG00000169045 E071 1.8951222 7.327090e-03 1.427387e-03 1.967912e-02 5 179622849 179622951 103 - 0.106 0.605 3.452
ENSG00000169045 E072 1.4970970 1.762439e-01 2.986139e-01 5.916311e-01 5 179622952 179623036 85 - 0.263 0.470 1.230
ENSG00000169045 E073 50.3041011 7.885729e-03 2.962057e-05 8.566981e-04 5 179623037 179623048 12 - 1.825 1.590 -0.799
ENSG00000169045 E074 80.0254256 1.983248e-04 8.724741e-16 1.595119e-13 5 179623049 179623164 116 - 2.039 1.768 -0.914
ENSG00000169045 E075 1.0987857 1.068930e-02 4.840218e-01 7.483503e-01 5 179623165 179623187 23 - 0.377 0.271 -0.677
ENSG00000169045 E076 0.2537079 2.751667e-01 4.082818e-01   5 179623188 179623280 93 - 0.000 0.156 11.216
ENSG00000169045 E077 2.6277938 1.325749e-02 2.001613e-02 1.270208e-01 5 179623281 179623594 314 - 0.324 0.670 1.733
ENSG00000169045 E078 13.5944413 9.814715e-04 8.578407e-05 2.095416e-03 5 179623595 179623635 41 - 1.309 1.004 -1.092
ENSG00000169045 E079 18.7355881 7.230267e-04 1.671079e-04 3.616693e-03 5 179623636 179623977 342 - 1.418 1.165 -0.885
ENSG00000169045 E080 0.7523703 1.456329e-02 1.650655e-01 4.345720e-01 5 179623978 179624096 119 - 0.106 0.319 1.967
ENSG00000169045 E081 0.5078857 1.598595e-02 7.874753e-02 2.876512e-01 5 179624097 179624115 19 - 0.000 0.271 13.033
ENSG00000169045 E082 0.6343927 1.517303e-02 3.999758e-02 1.939083e-01 5 179624116 179624202 87 - 0.000 0.319 13.356
ENSG00000169045 E083 0.5080420 1.587079e-02 7.877594e-02 2.877159e-01 5 179624203 179624316 114 - 0.000 0.271 13.034
ENSG00000169045 E084 2.9301735 9.751651e-03 3.206101e-01 6.135319e-01 5 179624317 179624669 353 - 0.663 0.529 -0.596
ENSG00000169045 E085 0.0000000       5 179633892 179634064 173 -      
ENSG00000169045 E086 0.2441377 1.665280e-02 8.459451e-01   5 179634065 179634157 93 - 0.106 0.085 -0.355
ENSG00000169045 E087 0.1268540 1.236849e-02 6.892903e-01   5 179634158 179634440 283 - 0.000 0.085 11.070
ENSG00000169045 E088 0.1268540 1.236849e-02 6.892903e-01   5 179634449 179634784 336 - 0.000 0.085 11.070

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