ENSG00000197381

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

  • Note:

    • About the Coding Potential: Please check the spreadsheet in the “Results” tag to confirm the coding potential. The above figure only show the predicted coding potential. The “gene_biotype” in the result spreadsheet is from the database record. Therefore, if you find conflicts between “gene_biotype” and “codingPotential”, please trust the “gene_biotype”.

    • Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

    • For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000348831 ENSG00000197381 No_inf pgKDN_inf ADARB1 protein_coding protein_coding 25.07817 22.63733 30.6056 0.5435934 2.633818 0.4349258 3.2048998 2.9404472 4.606618 1.1728007 1.7189484 0.6459028 0.12050000 0.130825 0.146600 0.015775 0.98807727 0.01352367 FALSE TRUE
ENST00000360697 ENSG00000197381 No_inf pgKDN_inf ADARB1 protein_coding protein_coding 25.07817 22.63733 30.6056 0.5435934 2.633818 0.4349258 3.7862381 7.8709099 1.473530 1.0462702 1.4735298 -2.4093283 0.16255833 0.347700 0.050225 -0.297475 0.01352367 0.01352367 FALSE TRUE
ENST00000389863 ENSG00000197381 No_inf pgKDN_inf ADARB1 protein_coding protein_coding 25.07817 22.63733 30.6056 0.5435934 2.633818 0.4349258 3.4803510 2.3521645 4.201449 1.5276478 1.4557929 0.8342071 0.14760000 0.101450 0.149450 0.048000 0.82840636 0.01352367 FALSE TRUE
ENST00000631642 ENSG00000197381 No_inf pgKDN_inf ADARB1 protein_coding protein_coding_CDS_not_defined 25.07817 22.63733 30.6056 0.5435934 2.633818 0.4349258 1.7819534 0.0000000 2.517964 0.0000000 1.8827749 7.9818322 0.05880833 0.000000 0.070450 0.070450 0.50584665 0.01352367   FALSE
ENST00000705393 ENSG00000197381 No_inf pgKDN_inf ADARB1 protein_coding protein_coding 25.07817 22.63733 30.6056 0.5435934 2.633818 0.4349258 1.8972050 2.4082033 2.727258 1.1315927 1.6062592 0.1787961 0.07118333 0.108675 0.081500 -0.027175 0.85414603 0.01352367 FALSE TRUE
MSTRG.18921.13 ENSG00000197381 No_inf pgKDN_inf ADARB1 protein_coding   25.07817 22.63733 30.6056 0.5435934 2.633818 0.4349258 1.7207766 1.9171082 2.553299 0.3074728 1.2094408 0.4115640 0.06754167 0.085075 0.091625 0.006550 0.91992887 0.01352367   FALSE
MSTRG.18921.17 ENSG00000197381 No_inf pgKDN_inf ADARB1 protein_coding   25.07817 22.63733 30.6056 0.5435934 2.633818 0.4349258 1.4948382 0.0000000 3.036134 0.0000000 1.1531603 8.2508357 0.05572500 0.000000 0.096800 0.096800 0.04049773 0.01352367   FALSE
MSTRG.18921.4 ENSG00000197381 No_inf pgKDN_inf ADARB1 protein_coding   25.07817 22.63733 30.6056 0.5435934 2.633818 0.4349258 1.5038862 0.5424618 1.374541 0.4128557 0.8247869 1.3254610 0.06992500 0.023025 0.050700 0.027675 0.94808599 0.01352367 FALSE TRUE
MSTRG.18921.5 ENSG00000197381 No_inf pgKDN_inf ADARB1 protein_coding   25.07817 22.63733 30.6056 0.5435934 2.633818 0.4349258 0.9769603 0.0000000 2.101507 0.0000000 1.2201608 7.7221290 0.03471667 0.000000 0.063925 0.063925 0.49494781 0.01352367   FALSE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

Help

Please Click HERE to learn more details about the results of IsoformSwitchAnalyzeR.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand pgKDN.inf No.inf log2fold_No.inf_pgKDN.inf
ENSG00000197381 E001 0.0000000       21 45073853 45073903 51 +      
ENSG00000197381 E002 0.0000000       21 45074569 45074579 11 +      
ENSG00000197381 E003 0.0000000       21 45074580 45074590 11 +      
ENSG00000197381 E004 0.1187032 0.0118717579 5.104453e-01   21 45074591 45074591 1 + 0.098 0.000 -10.408
ENSG00000197381 E005 0.2357071 0.0157060977 2.247202e-01   21 45074592 45074593 2 + 0.178 0.000 -13.712
ENSG00000197381 E006 0.4729834 0.0157928138 3.983700e-02   21 45074594 45074599 6 + 0.304 0.000 -14.624
ENSG00000197381 E007 0.5906140 0.0143904190 1.753590e-02 1.161770e-01 21 45074600 45074600 1 + 0.356 0.000 -14.915
ENSG00000197381 E008 0.9517557 0.0115683320 2.198299e-02 1.345931e-01 21 45074601 45074611 11 + 0.443 0.092 -2.909
ENSG00000197381 E009 1.2051167 0.0102625321 1.769569e-01 4.513381e-01 21 45074612 45074615 4 + 0.443 0.233 -1.325
ENSG00000197381 E010 7.1690649 0.0022337067 1.040797e-01 3.370745e-01 21 45074616 45074776 161 + 0.995 0.824 -0.646
ENSG00000197381 E011 3.7908624 0.0036745133 7.431859e-01 8.984196e-01 21 45074777 45074793 17 + 0.704 0.657 -0.195
ENSG00000197381 E012 0.0000000       21 45074794 45074863 70 +      
ENSG00000197381 E013 0.2541163 0.0160219419 2.612594e-01   21 45116933 45117038 106 + 0.000 0.168 12.445
ENSG00000197381 E014 0.6355253 0.0272211956 2.491359e-02 1.451245e-01 21 45118564 45118564 1 + 0.000 0.339 13.616
ENSG00000197381 E015 1.3726922 0.2444979226 2.389406e-01 5.279045e-01 21 45118565 45118578 14 + 0.246 0.461 1.312
ENSG00000197381 E016 1.9904657 0.3335831422 2.176471e-01 5.041479e-01 21 45118579 45118619 41 + 0.356 0.556 1.034
ENSG00000197381 E017 1.5892308 0.1481207671 8.467364e-01 9.456418e-01 21 45120794 45120804 11 + 0.443 0.383 -0.325
ENSG00000197381 E018 5.3372542 0.0049156739 5.038528e-02 2.217808e-01 21 45120805 45120942 138 + 0.909 0.679 -0.909
ENSG00000197381 E019 2.3874469 0.0058834723 7.671708e-04 1.224298e-02 21 45120943 45120959 17 + 0.725 0.233 -2.605
ENSG00000197381 E020 7.9798487 0.0045508378 1.856398e-03 2.413765e-02 21 45128402 45128452 51 + 1.094 0.775 -1.202
ENSG00000197381 E021 12.5767860 0.0125958436 3.834005e-04 7.061220e-03 21 45128453 45128573 121 + 1.279 0.944 -1.208
ENSG00000197381 E022 0.2539903 0.0160972533 2.611576e-01   21 45132215 45132306 92 + 0.000 0.168 12.445
ENSG00000197381 E023 0.2542726 0.2553935600 3.205184e-01   21 45133559 45133682 124 + 0.000 0.168 11.877
ENSG00000197381 E024 8.1171163 0.0102788662 8.876892e-03 7.423884e-02 21 45134715 45134832 118 + 1.085 0.808 -1.038
ENSG00000197381 E025 6.0048841 0.0026281933 9.643857e-01 9.924623e-01 21 45137081 45137554 474 + 0.850 0.839 -0.043
ENSG00000197381 E026 2.0773227 0.0066418475 7.267199e-01 8.907457e-01 21 45143142 45143231 90 + 0.516 0.461 -0.272
ENSG00000197381 E027 9.2486072 0.0264234971 1.220320e-01 3.695715e-01 21 45144631 45144962 332 + 1.094 0.920 -0.640
ENSG00000197381 E028 5.1832143 0.0031271556 2.048585e-03 2.602789e-02 21 45144963 45145163 201 + 0.947 0.584 -1.471
ENSG00000197381 E029 28.7207385 0.0179467524 4.338337e-04 7.799462e-03 21 45145164 45146499 1336 + 1.600 1.319 -0.968
ENSG00000197381 E030 0.6344230 0.1600166977 4.015252e-02 1.942056e-01 21 45152530 45152708 179 + 0.000 0.339 13.258
ENSG00000197381 E031 0.5991122 0.0142671787 1.551493e-01 4.208953e-01 21 45160118 45160195 78 + 0.304 0.092 -2.102
ENSG00000197381 E032 0.4798448 0.0153725322 2.940857e-01   21 45160196 45160223 28 + 0.246 0.092 -1.687
ENSG00000197381 E033 4.1195865 0.0041335426 6.254828e-02 2.512085e-01 21 45171610 45171641 32 + 0.818 0.584 -0.977
ENSG00000197381 E034 6.1728759 0.0126363160 1.508206e-02 1.054766e-01 21 45171642 45171684 43 + 0.983 0.700 -1.102
ENSG00000197381 E035 0.2442663 0.0163239192 9.662449e-01   21 45171685 45171759 75 + 0.098 0.092 -0.102
ENSG00000197381 E036 40.2401656 0.0018629751 4.968312e-05 1.321958e-03 21 45175730 45176409 680 + 1.711 1.508 -0.694
ENSG00000197381 E037 23.6676815 0.0007484540 1.651372e-04 3.578350e-03 21 45176410 45176664 255 + 1.501 1.267 -0.812
ENSG00000197381 E038 1.5763348 0.0182697218 3.631628e-01 6.521794e-01 21 45177067 45177547 481 + 0.481 0.339 -0.780
ENSG00000197381 E039 10.7408993 0.0019641884 2.728096e-01 5.665657e-01 21 45180330 45180435 106 + 1.120 1.019 -0.365
ENSG00000197381 E040 5.4945478 0.0026149150 5.329260e-01 7.834183e-01 21 45180436 45180444 9 + 0.850 0.775 -0.295
ENSG00000197381 E041 1.3533717 0.0180634278 8.411259e-01 9.430543e-01 21 45181480 45181516 37 + 0.356 0.383 0.161
ENSG00000197381 E042 19.8000799 0.0007860548 3.318176e-01 6.239758e-01 21 45182585 45182753 169 + 1.353 1.283 -0.245
ENSG00000197381 E043 14.1950650 0.0009941247 6.352305e-01 8.442503e-01 21 45183362 45183510 149 + 1.203 1.160 -0.152
ENSG00000197381 E044 7.7676115 0.0166632494 4.490586e-02 2.071284e-01 21 45184474 45184593 120 + 1.047 0.824 -0.839
ENSG00000197381 E045 19.9655173 0.0062571585 2.147425e-02 1.326985e-01 21 45184923 45185091 169 + 1.404 1.232 -0.600
ENSG00000197381 E046 24.0241695 0.0006195265 4.265664e-02 2.012824e-01 21 45204555 45204736 182 + 1.461 1.334 -0.441
ENSG00000197381 E047 18.9398959 0.0008402609 2.896771e-01 5.832909e-01 21 45220836 45220970 135 + 1.338 1.261 -0.270
ENSG00000197381 E048 9.7362811 0.0014142193 2.224171e-01 5.097456e-01 21 45220971 45221014 44 + 0.972 1.074 0.377
ENSG00000197381 E049 12.0298211 0.0020999793 7.348943e-01 8.948191e-01 21 45222018 45222107 90 + 1.103 1.123 0.075
ENSG00000197381 E050 73.9905155 0.0002269612 4.237858e-01 7.030163e-01 21 45222108 45223577 1470 + 1.863 1.883 0.066
ENSG00000197381 E051 108.7644611 0.0001773169 1.533412e-16 3.029416e-14 21 45223578 45225546 1969 + 1.908 2.128 0.738
ENSG00000197381 E052 131.0735566 0.0001431598 7.944566e-21 2.279161e-18 21 45225547 45226560 1014 + 1.986 2.209 0.747

Help

Please Click HERE to learn more details about the results from DEXseq.