ENSG00000214826

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

  • Note:

    • About the Coding Potential: Please check the spreadsheet in the “Results” tag to confirm the coding potential. The above figure only show the predicted coding potential. The “gene_biotype” in the result spreadsheet is from the database record. Therefore, if you find conflicts between “gene_biotype” and “codingPotential”, please trust the “gene_biotype”.

    • Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

    • For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000432996 ENSG00000214826 No_inf pgKDN_inf   unprocessed_pseudogene unprocessed_pseudogene 10.10037 11.80347 9.967159 0.8970755 2.153365 -0.2437321 0.9245953 1.317785 0.8282730 0.2993586 0.1496372 -0.6635291 0.10037500 0.120000 0.097250 -0.022750 0.94248686 0.04010384 TRUE TRUE
MSTRG.6018.1 ENSG00000214826 No_inf pgKDN_inf   unprocessed_pseudogene   10.10037 11.80347 9.967159 0.8970755 2.153365 -0.2437321 4.7635283 6.150473 3.4512456 0.5640178 0.3902581 -0.8317499 0.49900000 0.538000 0.368250 -0.169750 0.63038989 0.04010384 FALSE TRUE
MSTRG.6018.4 ENSG00000214826 No_inf pgKDN_inf   unprocessed_pseudogene   10.10037 11.80347 9.967159 0.8970755 2.153365 -0.2437321 0.9251976 1.422349 0.3747122 0.8220908 0.3747122 -1.8965318 0.08506667 0.111525 0.040075 -0.071450 0.82818222 0.04010384 FALSE TRUE
MSTRG.6018.5 ENSG00000214826 No_inf pgKDN_inf   unprocessed_pseudogene   10.10037 11.80347 9.967159 0.8970755 2.153365 -0.2437321 0.8445468 0.000000 2.5336405 0.0000000 2.5336405 7.9907509 0.05220833 0.000000 0.156625 0.156625 0.82515381 0.04010384   FALSE
MSTRG.6018.6 ENSG00000214826 No_inf pgKDN_inf   unprocessed_pseudogene   10.10037 11.80347 9.967159 0.8970755 2.153365 -0.2437321 1.1448952 0.000000 1.5824119 0.0000000 0.6035137 7.3150697 0.11636667 0.000000 0.165800 0.165800 0.04010384 0.04010384 FALSE FALSE
MSTRG.6018.7 ENSG00000214826 No_inf pgKDN_inf   unprocessed_pseudogene   10.10037 11.80347 9.967159 0.8970755 2.153365 -0.2437321 1.1247380 2.662027 0.7121873 1.1213731 0.7121873 -1.8874895 0.10705000 0.210475 0.110675 -0.099800 0.47856743 0.04010384 FALSE FALSE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

Help

Please Click HERE to learn more details about the results of IsoformSwitchAnalyzeR.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand pgKDN.inf No.inf log2fold_No.inf_pgKDN.inf
ENSG00000214826 E001 7.2644973 0.003475184 0.01834532 0.11972850 12 9417715 9418672 958 - 0.707 0.932 0.883
ENSG00000214826 E002 0.0000000       12 9418673 9418699 27 -      
ENSG00000214826 E003 0.0000000       12 9418700 9418774 75 -      
ENSG00000214826 E004 0.7256463 0.017984163 0.07421610 0.27770022 12 9418775 9418893 119 - 0.396 0.121 -2.212
ENSG00000214826 E005 0.2352613 0.073754038 0.07087627   12 9418894 9418929 36 - 0.242 0.000 -13.539
ENSG00000214826 E006 0.6105691 0.018951006 0.18270152 0.45923586 12 9419112 9419190 79 - 0.326 0.121 -1.798
ENSG00000214826 E007 0.4918659 0.018853986 0.42469686   12 9419489 9419573 85 - 0.242 0.121 -1.213
ENSG00000214826 E008 0.6164864 0.018058790 0.66656143 0.86133908 12 9419981 9420081 101 - 0.242 0.171 -0.628
ENSG00000214826 E009 0.1268540 0.013211602 1.00000000   12 9420189 9420255 67 - 0.000 0.065 10.098
ENSG00000214826 E010 0.7157354 0.018075531 0.00820940 0.07034728 12 9420515 9420664 150 - 0.457 0.065 -3.534
ENSG00000214826 E011 2.8592798 0.005592562 0.93785751 0.98211507 12 9421388 9421491 104 - 0.557 0.553 -0.020
ENSG00000214826 E012 1.8536105 0.009569879 0.46326376 0.73322733 12 9421818 9421890 73 - 0.510 0.389 -0.628
ENSG00000214826 E013 0.0000000       12 9421942 9421965 24 -      
ENSG00000214826 E014 0.0000000       12 9422565 9422621 57 -      
ENSG00000214826 E015 0.1272623 0.013239732 1.00000000   12 9424316 9424348 33 - 0.000 0.065 10.098
ENSG00000214826 E016 1.2604435 0.016300131 0.11586108 0.35896434 12 9424528 9424640 113 - 0.138 0.389 1.957
ENSG00000214826 E017 1.6314351 0.013150356 0.18687540 0.46486099 12 9425471 9425602 132 - 0.242 0.442 1.247
ENSG00000214826 E018 0.1268540 0.013211602 1.00000000   12 9425716 9425824 109 - 0.000 0.065 10.098
ENSG00000214826 E019 0.1176306 0.012165180 0.21427809   12 9426082 9426120 39 - 0.138 0.000 -12.717
ENSG00000214826 E020 1.6075153 0.008750232 0.57190417 0.80803394 12 9427633 9427700 68 - 0.457 0.359 -0.534
ENSG00000214826 E021 1.4898846 0.009329238 0.87082880 0.95559065 12 9427821 9427865 45 - 0.396 0.359 -0.213
ENSG00000214826 E022 0.3807797 0.086971351 0.41444211   12 9429132 9429211 80 - 0.000 0.171 11.477
ENSG00000214826 E023 0.0000000       12 9429560 9429606 47 -      
ENSG00000214826 E024 0.6162956 0.017793676 0.66759608 0.86160951 12 9430588 9430740 153 - 0.242 0.171 -0.627
ENSG00000214826 E025 0.1187032 0.012287091 0.21422821   12 9431114 9431170 57 - 0.138 0.000 -12.717
ENSG00000214826 E026 0.1187032 0.012287091 0.21422821   12 9432366 9432574 209 - 0.138 0.000 -12.717
ENSG00000214826 E027 0.0000000       12 9432939 9432968 30 -      
ENSG00000214826 E028 0.0000000       12 9432969 9433056 88 -      
ENSG00000214826 E029 0.0000000       12 9433308 9433415 108 -      
ENSG00000214826 E030 0.0000000       12 9434026 9434139 114 -      
ENSG00000214826 E031 0.0000000       12 9436940 9437027 88 -      
ENSG00000214826 E032 0.0000000       12 9437028 9437104 77 -      
ENSG00000214826 E033 0.0000000       12 9437257 9437274 18 -      
ENSG00000214826 E034 0.0000000       12 9437403 9437421 19 -      
ENSG00000214826 E035 1.2433575 0.010566224 0.94334528 0.98426032 12 9437422 9437489 68 - 0.326 0.327 0.010
ENSG00000214826 E036 1.7430310 0.009113489 0.83438962 0.94035591 12 9438011 9438259 249 - 0.396 0.416 0.109
ENSG00000214826 E037 0.0000000       12 9443535 9443612 78 -      
ENSG00000214826 E038 0.8705656 0.015790290 0.89858415 0.96665545 12 9443613 9443682 70 - 0.242 0.256 0.109
ENSG00000214826 E039 0.9881962 0.121941272 0.77367291 0.91296339 12 9447982 9448103 122 - 0.326 0.256 -0.475
ENSG00000214826 E040 0.7529694 0.016501159 0.45119589 0.72429309 12 9448104 9448229 126 - 0.138 0.256 1.109

Help

Please Click HERE to learn more details about the results from DEXseq.